RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 VN1R17PQ8TDU5 208 aa13.84□□□□□ -0.19
TRIM39-201ENST00000376656 FRYQ5TBA9 3013 aa13.83□□□□□ -0.19
TRIM39-201ENST00000376656 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
TRIM39-201ENST00000376656 EPHA8P29322 1005 aaPredicted RBP13.83□□□□□ -0.2
TRIM39-201ENST00000376656 ZNF645Q8N7E2 425 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 PKIBQ9C010 78 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 F2Z2F3 143 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 J3QT63 122 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 CCL4P13236 92 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 SELENOTP62341 195 aa13.83□□□□□ -0.2
TRIM39-201ENST00000376656 MBNL3Q9NUK0 354 aaKnown RBP13.83□□□□□ -0.2
TRIM39-201ENST00000376656 SERPINA7P05543 415 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 GFRA1P56159 465 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 LINC00205P59089 165 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 WDR86Q86TI4 376 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
TRIM39-201ENST00000376656 MCEMP1Q8IX19 187 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 OR2Y1Q8NGV0 311 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 OR2J1Q9GZK6 312 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 PAFAH1B2P68402 229 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 TRIP6Q15654 476 aaKnown RBP13.82□□□□□ -0.2
TRIM39-201ENST00000376656 OCC1Q8TAD7 63 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 LINC00470Q9BZP3 86 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 SCO2A0A1W2PP80 73 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 CRISP2P16562 243 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 TIMP3P35625 211 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 Q0VFX4 171 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 TMEM183BQ1AE95 376 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 WIPI2Q9Y4P8 454 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 CELSR3Q9NYQ7 3312 aa13.82□□□□□ -0.2
TRIM39-201ENST00000376656 A0A1W2PPV4 95 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 CEBPDP49716 269 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-201ENST00000376656 MRPS11P82912 194 aaKnown RBP13.81□□□□□ -0.2
TRIM39-201ENST00000376656 OR52L2PQ8NGH6 319 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 OR10G8Q8NGN5 311 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 VAMP8Q9BV40 100 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 MRPL18Q9H0U6 180 aaKnown RBP13.81□□□□□ -0.2
TRIM39-201ENST00000376656 CACNA1DQ01668 2161 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 IGKV3D-15A0A087WSY6 115 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 C15orf62A8K5M9 175 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 SLC17A3O00476 420 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 TFPI2P48307 235 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 ZNF90Q03938 601 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 EIF4EBP1Q13541 118 aaPredicted RBP13.81□□□□□ -0.2
TRIM39-201ENST00000376656 WDR83OSQ9Y284 106 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 RNF114Q9Y508 228 aa13.81□□□□□ -0.2
TRIM39-201ENST00000376656 ARL14EPLP0DKL9 152 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 COMPP49747 757 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-201ENST00000376656 IL11RAQ14626 422 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 HLA-DRB5Q30154 266 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 CIB3Q96Q77 187 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-201ENST00000376656 IL6RP08887 468 aaPredicted RBP13.8□□□□□ -0.2
TRIM39-201ENST00000376656 H2BFWTQ7Z2G1 175 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 LINC00614P0C842 121 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 ESDP10768 282 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 CD1BP29016 333 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 SCCPDHQ8NBX0 429 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 OR5AU1Q8NGC0 362 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 MSL2Q9HCI7 577 aa13.8□□□□□ -0.2
TRIM39-201ENST00000376656 CRYABP02511 175 aaKnown RBP13.79□□□□□ -0.2
TRIM39-201ENST00000376656 RAC2P15153 192 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 PLP2Q04941 152 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 OR5I1Q13606 314 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 DMRTA1Q5VZB9 504 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 RAB1CQ92928 201 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 CBY1Q9Y3M2 126 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 RRHO14718 337 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 RAB29O14966 203 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 NEURL1O76050 574 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 CLDN14O95500 239 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 MT-CO3P00414 261 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 COL8A2P25067 703 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 FOLR3P41439 243 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 PSG7Q13046 419 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 BAGE2Q86Y30 109 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 CELA3AP09093 270 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 ARR3P36575 388 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 KRTCAP3Q53RY4 240 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 SAP25Q8TEE9 199 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 QTRT1Q9BXR0 403 aaKnown RBP13.79□□□□□ -0.2
TRIM39-201ENST00000376656 SAMD10Q9BYL1 202 aa13.79□□□□□ -0.2
TRIM39-201ENST00000376656 VPS13AQ96RL7 3174 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 C12orf77C9JDV5 145 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 K7EN84 100 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 CDIPTO14735 213 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 NXPH2O95156 264 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 OTX2P32243 289 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 ERVK11-1P61568 191 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 CATR1Q13166 79 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 ZBTB34Q8NCN2 500 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 PSPNO60542 156 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 RANP62826 216 aaKnown RBP13.78□□□□□ -0.2
TRIM39-201ENST00000376656 OR1L6Q8NGR2 347 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 GALMQ96C23 342 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 IL36BQ9NZH7 164 aa13.78□□□□□ -0.2
TRIM39-201ENST00000376656 FBXL7Q9UJT9 491 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms