RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 RBFOX2O43251 390 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHTOP-203ENST00000368690 WDR1O75083 606 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 CRISP2P16562 243 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 NBL1P41271 181 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 FOLR3P41439 243 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 PIP4P1Q86T03 277 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 RPS19BP1Q86WX3 136 aaKnown RBP14.62□□□□□ -0.07
CHTOP-203ENST00000368690 OR10D3Q8NH80 312 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 DTD1Q8TEA8 209 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF552Q9H707 407 aaPredicted RBP14.62□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF292O60281 2723 aa14.62□□□□□ -0.07
CHTOP-203ENST00000368690 TRBV9A0A0B4J1U6 114 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 C9orf172C9J069 976 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 COX6A1P12074 109 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 CD82P27701 267 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 TIMP3P35625 211 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 MLF1P58340 268 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF645Q8N7E2 425 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 TCTEX1D1Q8N7M0 179 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 OR10G8Q8NGN5 311 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 SGCZQ96LD1 299 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 HSPB9Q9BQS6 159 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 OPN3Q9H1Y3 402 aaPredicted RBP14.61□□□□□ -0.07
CHTOP-203ENST00000368690 FOXJ2Q9P0K8 574 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 CLN8Q9UBY8 286 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 WDR83OSQ9Y284 106 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 WIPI2Q9Y4P8 454 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 A0A1W2PNU3 283 aaPredicted RBP14.61□□□□□ -0.07
CHTOP-203ENST00000368690 KLF7O75840 302 aaPredicted RBP14.61□□□□□ -0.07
CHTOP-203ENST00000368690 ATP5G3P48201 142 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 PRR18Q8N4B5 295 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 Q8N7P7 452 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 IL36BQ9NZH7 164 aa14.61□□□□□ -0.07
CHTOP-203ENST00000368690 ODAMA1E959 279 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 ANKRD30BLA7E2S9 258 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 RAB29O14966 203 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 MPDU1O75352 247 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 SERF1AO75920 110 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 WISP2O76076 250 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 FTH1P19P0C7X4 201 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 SELEP16581 610 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 PLA2G5P39877 138 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 COMPP49747 757 aaPredicted RBP14.6□□□□□ -0.07
CHTOP-203ENST00000368690 EIF4EBP1Q13541 118 aaPredicted RBP14.6□□□□□ -0.07
CHTOP-203ENST00000368690 TDRG1Q3Y452 100 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 ANKRD39Q53RE8 183 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 TCF23Q7RTU1 214 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 TIPARPQ7Z3E1 657 aaKnown RBP14.6□□□□□ -0.07
CHTOP-203ENST00000368690 YRDCQ86U90 279 aaKnown RBP14.6□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF114Q8NC26 417 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 OR2Y1Q8NGV0 311 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF488Q96MN9 340 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 TRAPPC2LQ9UL33 140 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 LY96Q9Y6Y9 160 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 C5orf49A4QMS7 147 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 J3QT63 122 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 CRYAAP02489 173 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 PCP4P48539 62 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 TMEM204Q9BSN7 226 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 DERL1Q9BUN8 251 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 PATZ1Q9HBE1 687 aaKnown RBP14.6□□□□□ -0.07
CHTOP-203ENST00000368690 MSL2Q9HCI7 577 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 PAM16Q9Y3D7 125 aa14.6□□□□□ -0.07
CHTOP-203ENST00000368690 IGKV3D-15A0A087WSY6 115 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 GRIFINA4D1Z8 144 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 TNFSF15O95150 251 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 CLDN14O95500 239 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 ARF1P84077 181 aaKnown RBP14.59□□□□□ -0.07
CHTOP-203ENST00000368690 CATR1Q13166 79 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 OR5I1Q13606 314 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 Q8IYB0 196 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 ARL6IP6Q8N6S5 226 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 RNF2Q99496 336 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 MRPL18Q9H0U6 180 aaKnown RBP14.59□□□□□ -0.07
CHTOP-203ENST00000368690 CELSR3Q9NYQ7 3312 aa14.59□□□□□ -0.07
CHTOP-203ENST00000368690 A0A1W2PPV4 95 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 ZG16O60844 167 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 OTX2P32243 289 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 FBXW9Q5XUX1 488 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 CT55Q8WUE5 264 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 QTRT1Q9BXR0 403 aaKnown RBP14.58□□□□□ -0.07
CHTOP-203ENST00000368690 SLC45A2Q9UMX9 530 aa14.58□□□□□ -0.07
CHTOP-203ENST00000368690 ZNF407Q9C0G0 2248 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 AHCTF1Q8WYP5 2266 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 CNOT1A5YKK6 2376 aaKnown RBP14.58□□□□□ -0.08
CHTOP-203ENST00000368690 TRBV20OR9-2A0A075B6H5 130 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 EGR1P18146 543 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 CCNOP22674 350 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 G6PCP35575 357 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 CDKN1AP38936 164 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 ZNF90Q03938 601 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 DMRTA1Q5VZB9 504 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 VN1R17PQ8TDU5 208 aa14.58□□□□□ -0.08
CHTOP-203ENST00000368690 SDK2Q58EX2 2172 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 ARHGAP21Q5T5U3 1957 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 SAA2-SAA4A0A096LPE2 208 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 RAB7AP51149 207 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 WDR31Q8NA23 367 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 SLC35E1Q96K37 410 aa14.57□□□□□ -0.08
CHTOP-203ENST00000368690 KCNIP1Q9NZI2 227 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms