RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DRAM1Q8N682 238 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 OR2Z1Q8NG97 314 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 FAM216AQ8WUB2 273 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 SPSB4Q96A44 273 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 PHF3Q92576 2039 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 IGKV3D-11A0A0A0MRZ8 115 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 TRAV1-1A0A0B4J248 108 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 RHBDL1O75783 438 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 OR51G1Q8NGK1 321 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM171Q8WVE6 324 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 SNRNP200O75643 2136 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 CEACAM18A8MTB9 384 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 OR2H2O95918 312 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 FAM87AP0C7U9 286 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 ORM2P19652 201 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 CRYBB3P26998 211 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 IL36BQ9NZH7 164 aa13.64□□□□□ -0.23
CLSTN1-201ENST00000361311 LRRC30A6NM36 301 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 S1PR2O95136 353 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 AMY1AP04745 511 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 IL11RAQ14626 422 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 NHLRC2Q8NBF2 726 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 LYZL4Q96KX0 146 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 ALKBH7Q9BT30 221 aaPredicted RBP13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM208Q9BTX3 173 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 DOCK9Q9BZ29 2069 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 CNIH1O95406 144 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 HBZP02008 142 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 C1QTNF9P0C862 333 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 GNB1P62873 340 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 SAXO1Q8IYX7 474 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 ZNF645Q8N7E2 425 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 TPRX1Q8N7U7 411 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 CACNA1GO43497 2377 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 ADMP35318 185 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 MRPS11P82912 194 aaKnown RBP13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 OR1L1Q8NH94 360 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 WNT5BQ9H1J7 359 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 LEPROTL1O95214 131 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 CLDN14O95500 239 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 EFEMP2O95967 443 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 COL8A1P27658 744 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 TFF3Q07654 80 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 PCED1AQ9H1Q7 454 aa13.63□□□□□ -0.23
CLSTN1-201ENST00000361311 TNFSF13O75888 250 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 GZMHP20718 246 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 DMWDQ09019 674 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 SPSB3Q6PJ21 355 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 DUSP15Q9H1R2 295 aaPredicted RBP13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 MKRN2OSH3BPM6 223 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 LINC00614P0C842 121 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 SFTPCP11686 197 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM11P17152 192 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM45BQ96B21 275 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 DYNLRB1Q9NP97 96 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 IL36GQ9NZH8 169 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 TRPM7Q96QT4 1865 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 HES3Q5TGS1 186 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 NRN1Q9NPD7 142 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 WDR90Q96KV7 1748 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 UQCRFS1P47985 274 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 DOLPP1Q86YN1 238 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 MESP1Q9BRJ9 268 aa13.62□□□□□ -0.23
CLSTN1-201ENST00000361311 hCG_38984A0A1B0GV85 526 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 MARCH11A6NNE9 402 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 ZNF207O43670 478 aaKnown RBP13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 NAPSAO96009 420 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 CELA2AP08217 269 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 MMDQ15546 238 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 SAPCD1Q5SSQ6 148 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 ADTRPQ96IZ2 230 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 FBLL1A6NHQ2 334 aaKnown RBP13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 GCHFRP30047 84 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 ARL16Q0P5N6 197 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 OR8B3Q8NGG8 313 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 B4E171 279 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 TSPAN7P41732 249 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 SOX8P57073 446 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 TMEM256Q8N2U0 113 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 NLRC5Q86WI3 1866 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 DOCK8Q8NF50 2099 aa13.61□□□□□ -0.23
CLSTN1-201ENST00000361311 CENPWQ5EE01 88 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 FAM19A2Q8N3H0 131 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 OR2Y1Q8NGV0 311 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 ODAMA1E959 279 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 LYZL6O75951 148 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 RND2P52198 227 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 FAM90A2PQ658T7 463 aa13.6□□□□□ -0.23
CLSTN1-201ENST00000361311 OR8A1Q8NGG7 326 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms