RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 LOC390937A0A1W2PQ73 354 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 TFF2Q03403 129 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 S1PR2O95136 353 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 OR51G1Q8NGK1 321 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 JPT1Q9UK76 154 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
CHD4-201ENST00000357008 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 ADAMTS7Q9UKP4 1686 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 CELA2AP08217 269 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
CHD4-201ENST00000357008 CA7P43166 264 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 LCN2P80188 198 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 TCF24Q7RTU0 167 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 ITLN1Q8WWA0 313 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 MRPL32Q9BYC8 188 aaKnown RBP12.72□□□□□ -0.37
CHD4-201ENST00000357008 RPRMQ9NS64 109 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 IDI2-AS1Q9NZ38 188 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 IL9P15248 144 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 OTX1P32242 354 aaPredicted RBP12.72□□□□□ -0.37
CHD4-201ENST00000357008 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 SRSF12Q8WXF0 261 aaKnown RBP12.72□□□□□ -0.37
CHD4-201ENST00000357008 WFIKKN1Q96NZ8 548 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 A0A0G2JK05 382 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 PCP4P48539 62 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 STPG3Q8N7X2 389 aa12.72□□□□□ -0.37
CHD4-201ENST00000357008 SP7Q8TDD2 431 aaPredicted RBP12.72□□□□□ -0.37
CHD4-201ENST00000357008 LOXL3P58215 753 aa12.71□□□□□ -0.37
CHD4-201ENST00000357008 PTGDSP41222 190 aa12.71□□□□□ -0.37
CHD4-201ENST00000357008 GCHFRP30047 84 aa12.71□□□□□ -0.37
CHD4-201ENST00000357008 ATP5IP56385 69 aaPredicted RBP12.71□□□□□ -0.37
CHD4-201ENST00000357008 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
CHD4-201ENST00000357008 NABP2Q9BQ15 211 aa12.71□□□□□ -0.37
CHD4-201ENST00000357008 IGHV3-72A0A0B4J1Y9 119 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 MSGN1A6NI15 193 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 NUDT3O95989 172 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 IGLV3-21P80748 117 aaPredicted RBP12.71□□□□□ -0.38
CHD4-201ENST00000357008 RCC1LQ96I51 464 aaKnown RBP12.71□□□□□ -0.38
CHD4-201ENST00000357008 C16orf92Q96LL3 132 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 CCDC88CQ9P219 2028 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 AMMECR1LQ6DCA0 310 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.38
CHD4-201ENST00000357008 LOC105371267A0A1B0GV96 52 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 MARF1Q9Y4F3 1742 aaKnown RBP12.7□□□□□ -0.38
CHD4-201ENST00000357008 PSG9Q00887 426 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 EGR4Q05215 589 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 DRAM1Q8N682 238 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 METTL26Q96S19 204 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 NPBWR2P48146 333 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 GATAD1Q8WUU5 269 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 NEU1Q99519 415 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 WNT5BQ9H1J7 359 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 GSN-AS1Q9NRJ2 163 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 ATG2BQ96BY7 2078 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 TRAV30A0A087WSZ9 112 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 NPIPB6E9PJ23 425 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 H7C2G1 150 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 ABHD12Q8N2K0 398 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 SYT8Q8NBV8 401 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 TMEM56-RWDD3S4R434 201 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 C10orf128Q5T292 105 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 TMEM136Q6ZRR5 245 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 ZDHHC8Q9ULC8 765 aa12.7□□□□□ -0.38
CHD4-201ENST00000357008 TGIF1Q15583 401 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 TMEM30BQ3MIR4 351 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 A0A1W2PS18 150 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 CBLN1P23435 193 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 FCGR2BP31994 310 aaPredicted RBP12.69□□□□□ -0.38
CHD4-201ENST00000357008 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 UBTD1Q9HAC8 227 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ANOS1P23352 680 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 CTAG1AP78358 180 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ZNF146Q15072 292 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ATOH7Q8N100 152 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 DYNLRB2Q8TF09 96 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ARFGEF1Q9Y6D6 1849 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 PRR33A8MZF0 331 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 PATE3B3GLJ2 98 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 SLC25A17O43808 307 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 THY1P04216 161 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 FGF5P12034 268 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 CENPWQ5EE01 88 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 AHRRA9YTQ3 701 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 TMEM229AB2RXF0 380 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 MFAP4P55083 255 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 HILPDAQ9Y5L2 63 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 SS18L1O75177 396 aaPredicted RBP12.69□□□□□ -0.38
CHD4-201ENST00000357008 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
CHD4-201ENST00000357008 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
CHD4-201ENST00000357008 SLC25A53Q5H9E4 307 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 EBLN2Q6P2I7 272 aa12.69□□□□□ -0.38
CHD4-201ENST00000357008 ZNF600Q6ZNG1 722 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms