RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 PHB2Q99623 299 aa13.77□□□□□ -0.21
CKLF-202ENST00000345436 RANGRFQ9HD47 186 aaPredicted RBP13.77□□□□□ -0.21
CKLF-202ENST00000345436 PRELID3BQ9Y3B1 194 aa13.77□□□□□ -0.21
CKLF-202ENST00000345436 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
CKLF-202ENST00000345436 DNAH3Q8TD57 4116 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 SHISA3A0PJX4 238 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 CD36P16671 472 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 SCAND1P57086 179 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 GNG2P59768 71 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 TATDN3Q17R31 274 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 H1FOOQ8IZA3 346 aaPredicted RBP13.76□□□□□ -0.21
CKLF-202ENST00000345436 OR5T1Q8NG75 326 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 OSR1Q8TAX0 266 aaPredicted RBP13.76□□□□□ -0.21
CKLF-202ENST00000345436 MAFIPQ8WZ33 124 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 DAPK2Q9UIK4 370 aa13.76□□□□□ -0.21
CKLF-202ENST00000345436 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
CKLF-202ENST00000345436 A0A0B4J203 849 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 BRI3O95415 125 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 IGHV3-11P01762 117 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 SLURP1P55000 103 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 LINC00205P59089 165 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 CNIH2Q6PI25 160 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 ZNF773Q6PK81 442 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 USMG5Q96IX5 58 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 DCUN1D5Q9BTE7 237 aa13.75□□□□□ -0.21
CKLF-202ENST00000345436 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
CKLF-202ENST00000345436 MRPS7Q9Y2R9 242 aaKnown RBP13.75□□□□□ -0.21
CKLF-202ENST00000345436 IGHV4OR15-8A0A075B7B6 117 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 A0A087WW49 117 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 MPPED1O15442 326 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 TMEM127O75204 238 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 UBE2KP61086 200 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 C11orf87Q6NUJ2 197 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 ACSM6Q6P461 480 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 ZNF645Q8N7E2 425 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 OR2W1Q9Y3N9 320 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 U3KQK5 164 aa13.74□□□□□ -0.21
CKLF-202ENST00000345436 CRYZL1O95825 349 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 IGLV2-23P01705 113 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 CRYGBP07316 175 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
CKLF-202ENST00000345436 SFXN4Q6P4A7 337 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 TPSG1Q9NRR2 321 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 ETV7Q9Y603 341 aa13.73□□□□□ -0.21
CKLF-202ENST00000345436 SMIM30A4D0T7 59 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 PJVKQ0ZLH3 352 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 PRSS8Q16651 343 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 NR2C2APQ86WQ0 139 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 ANKRD13BQ86YJ7 626 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 VSTM2AQ8TAG5 236 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
CKLF-202ENST00000345436 SPIN2AQ99865 258 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 SPIN2BQ9BPZ2 258 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 AIFM2Q9BRQ8 373 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 DIABLOQ9NR28 239 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 COA4Q9NYJ1 87 aa13.72□□□□□ -0.21
CKLF-202ENST00000345436 A0A0A6YYH2 397 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 MSGN1A6NI15 193 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 A6NJ64 397 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 TUSC2O75896 110 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 HLA-DQB1P01920 261 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 SNRPBP14678 240 aaKnown RBP13.71□□□□□ -0.21
CKLF-202ENST00000345436 SDC2P34741 201 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 ARPC4P59998 168 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 TNXAQ16473 311 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 FAM209BQ5JX69 171 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 SLC25A42Q86VD7 318 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 MMD2Q8IY49 270 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 ACOT12Q8WYK0 555 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 DDB2Q92466 427 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 TINAGL1Q9GZM7 467 aaPredicted RBP13.71□□□□□ -0.21
CKLF-202ENST00000345436 RHBDL2Q9NX52 303 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 ANXA10Q9UJ72 324 aa13.71□□□□□ -0.21
CKLF-202ENST00000345436 LOC100506127A0A0U1RQW1 187 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 TMEM235A6NFC5 223 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 J3QRK9 145 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 FCGR3BO75015 233 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 GP9P14770 177 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 NFYAP23511 347 aaPredicted RBP13.7□□□□□ -0.22
CKLF-202ENST00000345436 IDNKQ5T6J7 187 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 KCTD9Q7L273 389 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 RSRP1Q9BUV0 290 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 VCX3AQ9NNX9 186 aa13.7□□□□□ -0.22
CKLF-202ENST00000345436 PEF1Q9UBV8 284 aaKnown RBP13.7□□□□□ -0.22
CKLF-202ENST00000345436 RBMX2Q9Y388 322 aaKnown RBP13.7□□□□□ -0.22
CKLF-202ENST00000345436 IGKV1D-8A0A087WSZ0 117 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 ANKRD34BA5PLL1 514 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 SRRM4A7MD48 611 aaKnown RBP13.69□□□□□ -0.22
CKLF-202ENST00000345436 SPNP16150 400 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 MXD1Q05195 221 aa13.69□□□□□ -0.22
CKLF-202ENST00000345436 CDK10Q15131 360 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms