RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 FBXW9Q5XUX1 488 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 MRPL41Q8IXM3 137 aaKnown RBP17.57■□□□□ 0.4
E2F1-201ENST00000343380 TMEM256Q8N2U0 113 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 RFESDQ8TAC1 157 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 SLC25A40Q8TBP6 338 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 FOXJ2Q9P0K8 574 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 TMEM30CPA0ZSE6 113 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 C15orf62A8K5M9 175 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 CLDN14O95500 239 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 PSG7Q13046 419 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 LPAL2Q16609 132 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 TBC1D28Q2M2D7 210 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 H2BFWTQ7Z2G1 175 aa17.57■□□□□ 0.4
E2F1-201ENST00000343380 CISD2Q8N5K1 135 aaKnown RBP17.57■□□□□ 0.4
E2F1-201ENST00000343380 C9orf172C9J069 976 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 VENTXO95231 258 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 CER1O95813 267 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 TDGF1P13385 188 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 RPL15P61313 204 aaKnown RBP17.56■□□□□ 0.4
E2F1-201ENST00000343380 Q3ZCU0 254 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 CST9LP1Q5W188 147 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 TMEM204Q9BSN7 226 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 QTRT1Q9BXR0 403 aaKnown RBP17.56■□□□□ 0.4
E2F1-201ENST00000343380 METRNQ9UJH8 293 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 SPENQ96T58 3664 aaKnown RBP17.56■□□□□ 0.4
E2F1-201ENST00000343380 CD82P27701 267 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 MPV17P39210 176 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 CNN1P51911 297 aaKnown RBP17.56■□□□□ 0.4
E2F1-201ENST00000343380 EDDM3BP56851 147 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 PAX5Q02548 391 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 TEX38Q6PEX7 206 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 GBGT1Q8N5D6 347 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 TMEM18Q96B42 140 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 DEFB127Q9H1M4 99 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 COL27A1Q8IZC6 1860 aaPredicted RBP17.56■□□□□ 0.4
E2F1-201ENST00000343380 GPR179Q6PRD1 2367 aa17.56■□□□□ 0.4
E2F1-201ENST00000343380 TRBV20OR9-2A0A075B6H5 130 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 RBFOX2O43251 390 aaKnown RBP eCLIP17.55■□□□□ 0.43e-9■■■■□ 24.8
E2F1-201ENST00000343380 SLC10A1Q14973 349 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 ACOT6Q3I5F7 207 aaPredicted RBP17.55■□□□□ 0.4
E2F1-201ENST00000343380 ZBTB34Q8NCN2 500 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 SPRY4Q9C004 299 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 PATZ1Q9HBE1 687 aaKnown RBP17.55■□□□□ 0.4
E2F1-201ENST00000343380 A0A0U1RQK1 487 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 A0A1W2PNU3 283 aaPredicted RBP17.55■□□□□ 0.4
E2F1-201ENST00000343380 ZNF320A2RRD8 509 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 RAB29O14966 203 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 CATR1Q13166 79 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 PLPPR2Q96GM1 343 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 DCTN5Q9BTE1 182 aa17.55■□□□□ 0.4
E2F1-201ENST00000343380 GABRA2P47869 451 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 MEOX1P50221 254 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 TCF23Q7RTU1 214 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 TMEM144Q7Z5S9 345 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 C11orf53Q8IXP5 236 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 HES4Q9HCC6 221 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 RYDENQ9NUL5 291 aaKnown RBP17.54■□□□□ 0.4
E2F1-201ENST00000343380 TP53TG5Q9Y2B4 290 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 ZFHX4Q86UP3 3567 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 MARCH11A6NNE9 402 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 OR9G9P0C7N8 305 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 DCAF10Q5QP82 559 aa17.54■□□□□ 0.4
E2F1-201ENST00000343380 GCH1P30793 250 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 PEAR1Q5VY43 1037 aaPredicted RBP17.53■□□□□ 0.4
E2F1-201ENST00000343380 OR13A1Q8NGR1 328 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 NANOS1Q8WY41 292 aaKnown RBP17.53■□□□□ 0.4
E2F1-201ENST00000343380 ATG101Q9BSB4 218 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 PSG11Q9UQ72 335 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 OOEPA6NGQ2 149 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 LTC4SQ16873 150 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 KCNIP4Q6PIL6 250 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 BEND2Q8NDZ0 799 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 NINJ1Q92982 152 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 CIB3Q96Q77 187 aaPredicted RBP17.53■□□□□ 0.4
E2F1-201ENST00000343380 WDR83OSQ9Y284 106 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 TRAPPC1Q9Y5R8 145 aa17.53■□□□□ 0.4
E2F1-201ENST00000343380 CD33P20138 364 aa17.52■□□□□ 0.4
E2F1-201ENST00000343380 HNF1AP20823 631 aa17.52■□□□□ 0.4
E2F1-201ENST00000343380 CD1BP29016 333 aa17.52■□□□□ 0.4
E2F1-201ENST00000343380 DIRC2Q96SL1 478 aa17.52■□□□□ 0.4
E2F1-201ENST00000343380 OBP2BQ9NPH6 170 aa17.52■□□□□ 0.4
E2F1-201ENST00000343380 PROP1O75360 226 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 LCN2P80188 198 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 RNFT1Q5M7Z0 435 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 SLC35E4Q6ICL7 350 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 FIP1L1Q6UN15 594 aaKnown RBP17.52■□□□□ 0.39
E2F1-201ENST00000343380 SDSLQ96GA7 329 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 LURAP1Q96LR2 239 aa17.52■□□□□ 0.39
E2F1-201ENST00000343380 C17orf112F2Z3M2 114 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 LYZL6O75951 148 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 LBHQ53QV2 105 aaPredicted RBP17.51■□□□□ 0.39
E2F1-201ENST00000343380 PRAMEF6Q5VXH4 476 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 SGMS2Q8NHU3 365 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 SPRR3Q9UBC9 169 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 PXMP4Q9Y6I8 212 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 IQCF6A8MYZ5 107 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 TMPRSS2O15393 492 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 ACP1P24666 158 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 FOXF2Q12947 444 aa17.51■□□□□ 0.39
E2F1-201ENST00000343380 VKORC1L1Q8N0U8 176 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms