RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 CBX3Q13185 183 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 PPP1R1AQ13522 171 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 SIGLECL1Q8N7X8 197 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 PIFOQ8TCI5 191 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 TP53RKQ96S44 253 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 KCNIP3Q9Y2W7 256 aa14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 ANK3Q12955 4377 aaKnown RBP14.35□□□□□ -0.11
SDCBP2-201ENST00000339987 H7C2Y5 167 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 PFDN1O60925 122 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 IGKV1D-33P01593 117 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 IGKV1-33P01594 117 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 OR4E1P0C645 316 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 FAM157CP0CG43 387 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 UCP1P25874 307 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 IER3P46695 156 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 TMEM177Q53S58 311 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 OR2B11Q5JQS5 317 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 OR2T10Q8NGZ9 312 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 OR5R1Q8NH85 324 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 RNF5Q99942 180 aa14.34□□□□□ -0.11
SDCBP2-201ENST00000339987 H3BUX3 64 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 RAMP3O60896 148 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 SFT2D2O95562 160 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 MOSP00540 346 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 IGKV1-16P04430 117 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 IL5P05113 134 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 OR5AC1P0C628 307 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 ANXA3P12429 323 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 RAB25P57735 213 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 ZNF585BQ52M93 769 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 Q8N6K4 173 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 OR4C13Q8NGP0 309 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 SSMEM1Q8WWF3 244 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 FLYWCH2Q96CP2 140 aaKnown RBP14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 EAF1Q96JC9 268 aaPredicted RBP14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 TMEM222Q9H0R3 208 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 BEX1Q9HBH7 125 aa14.33□□□□□ -0.11
SDCBP2-201ENST00000339987 PRAF2O60831 178 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 CRYZL1O95825 349 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 HPRT1P00492 218 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 IFNA2P01563 188 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 IGHV4-59P01825 116 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 RPA2P15927 270 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 VAMP1P23763 118 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 CD24P25063 80 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 DHRS2Q13268 280 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM187Q14656 261 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 SP6Q3SY56 376 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 C4orf46Q504U0 113 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 RBMS3Q6XE24 437 aaKnown RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 LYG2Q86SG7 212 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM86BQ8N661 226 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 GLYATL2Q8WU03 294 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 PLEKHA2Q9HB19 425 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 COMMD9Q9P000 198 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 PITPNC1Q9UKF7 332 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 TCF19Q9Y242 345 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 NSD1Q96L73 2696 aaPredicted RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 FN1P02751 2386 aaKnown RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 C9orf170A2RU37 121 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 A6NDX4 124 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 BTBD17A6NE02 478 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 DHFRP00374 187 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 HLA-AP01891 365 aaKnown RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 SERPINE2P07093 398 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 LPAR6P43657 344 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 RIPPLY3P57055 190 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 SRPXP78539 464 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 HES1Q14469 280 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 SLC9A3R2Q15599 337 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 ZNF418Q8TF45 676 aaPredicted RBP14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 POMT1Q9Y6A1 747 aa14.32□□□□□ -0.12
SDCBP2-201ENST00000339987 CDS2O95674 445 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM11P17152 192 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 LGALS7P47929 136 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 RPS16P62249 146 aaKnown RBP14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 FBLN7Q53RD9 439 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 LIAT1Q6ZQX7 453 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 OR8H1Q8NGG4 311 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 IL22RA2Q969J5 263 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 HARBI1Q96MB7 349 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM56Q96MV1 263 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 TSNAXQ99598 290 aaKnown RBP14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 TMEM56-RWDD3S4R434 201 aa14.31□□□□□ -0.12
SDCBP2-201ENST00000339987 MTORP42345 2549 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 PIGBOS1A0A0B4J2F0 54 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 SHOXO15266 292 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 HOXA3O43365 443 aaPredicted RBP14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 S1PR2O95136 353 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 SPDEFO95238 335 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 DUS4LO95620 317 aaKnown RBP14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 HRASP01112 189 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 BCAP31P51572 246 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 POU2AF1Q16633 256 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 ZNF431Q8TF32 576 aaPredicted RBP14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 RBMXL1Q96E39 390 aaKnown RBP14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 AIFM2Q9BRQ8 373 aa14.3□□□□□ -0.12
SDCBP2-201ENST00000339987 GPN1Q9HCN4 374 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms