RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 C17orf51A8MQB3 221 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 CTGFP29279 349 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 RIPPLY2Q5TAB7 128 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 LURAP1LQ8IV03 231 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 FAM181AQ8N9Y4 354 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 FAM60AQ9NP50 221 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 ZNF257Q9Y2Q1 563 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 ITGB4P16144 1822 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 FGF12P61328 243 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 CXorf51AA0A1B0GTR3 108 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 NDUFA3O95167 84 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 TBX6O95947 436 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-201ENST00000334504 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 SLC25A10Q9UBX3 287 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-201ENST00000334504 NRXN3Q9Y4C0 1643 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 MAST2Q6P0Q8 1798 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 AHDC1Q5TGY3 1603 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-201ENST00000334504 A0A087WWC5 75 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 IL11P20809 199 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 CACNG7P62955 275 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 SMIM8Q96KF7 97 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 NDUFS6O75380 124 aaKnown RBP8.44□□□□□ -1.06
COL4A6-201ENST00000334504 SERF1AO75920 110 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 CELA2BP08218 269 aaPredicted RBP8.44□□□□□ -1.06
COL4A6-201ENST00000334504 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 GOLT1AQ6ZVE7 132 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 TCF23Q7RTU1 214 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 SSC5DA1L4H1 1573 aa8.44□□□□□ -1.06
COL4A6-201ENST00000334504 IGHV3-72A0A0B4J1Y9 119 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 OR2H2O95918 312 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 ADMP35318 185 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 ZNF56Q15929 161 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 CD200R1LQ6Q8B3 271 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 AMELYQ99218 206 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 NRN1Q9NPD7 142 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 FAM90A26D6RGX4 464 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 ZNHIT1O43257 154 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 NUTF2P61970 127 aaKnown RBP8.43□□□□□ -1.06
COL4A6-201ENST00000334504 FAM74A4Q5TZK3 123 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 PRDM13Q9H4Q3 707 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 HEXA-AS1Q9H8Q6 139 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM56-RWDD3S4R434 201 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 IGHV3OR16-12A0A075B7B8 117 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 SRSF4Q08170 494 aaKnown RBP8.43□□□□□ -1.06
COL4A6-201ENST00000334504 CEACAM21Q3KPI0 293 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 STPG3Q8N7X2 389 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 RASL10BQ96S79 203 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 KCNMB2Q9Y691 235 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 TRBV5-7A0A0A0MS05 114 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM250H0YL14 139 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 NABP2Q9BQ15 211 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 TCFL5Q9UL49 500 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 A0A1W2PQM1 296 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 SSPNQ14714 243 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 ZNF818PQ6ZRF7 136 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 ANKRD33Q7Z3H0 272 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 MDP1Q86V88 176 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 CITED2Q99967 270 aaPredicted RBP8.43□□□□□ -1.06
COL4A6-201ENST00000334504 MAGEA5P43359 124 aa8.43□□□□□ -1.06
COL4A6-201ENST00000334504 SF3B6Q9Y3B4 125 aaKnown RBP8.43□□□□□ -1.06
COL4A6-201ENST00000334504 IGHV1OR21-1A0A087WYE8 117 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 MSGN1A6NI15 193 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 RPL8P62917 257 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 SRSF3P84103 164 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 IL11RAQ14626 422 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 C10orf128Q5T292 105 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 GLRX5Q86SX6 157 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 GPBAR1Q8TDU6 330 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 NRAPQ86VF7 1730 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 MYH14Q7Z406 1995 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 PIN1P1O15428 100 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 RCC1LQ96I51 464 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 DLEU1O43261 78 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 LIMS1P48059 325 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 RRN3P1Q2M238 152 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 C1orf100Q5SVJ3 147 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 ABHD12Q8N2K0 398 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 OR51G1Q8NGK1 321 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 ZNF385AQ96PM9 386 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 PSMG3Q9BT73 122 aaPredicted RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 MRPL32Q9BYC8 188 aaKnown RBP8.42□□□□□ -1.06
COL4A6-201ENST00000334504 SDF2L1Q9HCN8 221 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 A0A1W2PRS3 328 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 REG1AP05451 166 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 CD3EP07766 207 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 NXPH1P58417 271 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 OR5AN1Q8NGI8 311 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 TMEM170AQ8WVE7 144 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 SCGB3A1Q96QR1 104 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 UPK3AO75631 287 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 TBR1Q16650 682 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 DTX4Q9Y2E6 619 aa8.42□□□□□ -1.06
COL4A6-201ENST00000334504 CCL21O00585 134 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms