RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CFHR4Q92496 578 aa4.17□□□□□ -1.74
LRIT3-201ENST00000327908 R3HDM4Q96D70 268 aa4.17□□□□□ -1.74
LRIT3-201ENST00000327908 MARVELD1Q9BSK0 173 aa4.17□□□□□ -1.74
LRIT3-201ENST00000327908 CCL28Q9NRJ3 127 aa4.17□□□□□ -1.74
LRIT3-201ENST00000327908 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.17□□□□□ -1.74
LRIT3-201ENST00000327908 ZMAT5Q9UDW3 170 aaKnown RBP4.17□□□□□ -1.74
LRIT3-201ENST00000327908 A0A0U1RQK1 487 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MEIS3P1A6NDR6 274 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 SOX15O60248 233 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 RLN2P04090 185 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 CT45A6P0DMU7 189 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 CT45A5P0DMU8 189 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 CT45A7P0DMV0 189 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 LPAR6P43657 344 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 BCAP31P51572 246 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 UBA52P62987 128 aaKnown RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 KLRD1Q13241 179 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 C5orf64Q2M2E5 130 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 C4orf46Q504U0 113 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ETFRF1Q6IPR1 90 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 GSG1LQ6UXU4 331 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF429Q86V71 674 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 Q8N2B8 174 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MARCH1Q8TCQ1 289 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 EAF1Q96JC9 268 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 COMMD5Q9GZQ3 224 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MGAQ8IWI9 3026 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 FCGR3BO75015 233 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 FCN3O75636 299 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 NUP62P37198 522 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ERHP84090 104 aaKnown RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MMDQ15546 238 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 BAK1Q16611 211 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ODF3L1Q8IXM7 274 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 C12orf45Q8N5I9 185 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 C22orf15Q8WYQ4 148 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MAFIPQ8WZ33 124 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 OCEL1Q9H607 264 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 SLA2Q9H6Q3 261 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 FOXA2Q9Y261 457 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 DCHS1Q96JQ0 3298 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 CR1P17927 2039 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 H3BUX3 64 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 WRBO00258 174 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 UPK2O00526 184 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 IGKV1D-33P01593 117 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 IGKV1-33P01594 117 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 TFF1P04155 84 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ELANEP08246 267 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 HLA-GP17693 338 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 OMGP23515 440 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 VDAC2P45880 294 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 TAS2R30P59541 319 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 SPCS3P61009 180 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF562Q6V9R5 426 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 GLDNQ6ZMI3 551 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 PUSL1Q8N0Z8 303 aaKnown RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 MITD1Q8WV92 249 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 SDHCQ99643 169 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 USP9XQ93008 2570 aaPredicted RBP4.16□□□□□ -1.74
LRIT3-201ENST00000327908 PRR14LQ5THK1 2151 aa4.16□□□□□ -1.74
LRIT3-201ENST00000327908 IGKV1D-8A0A087WSZ0 117 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 TRAV39A0A0B4J263 110 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 A0A0G2JLM5 398 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 MMP23AO75900 390 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 KBTBD11O94819 623 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 CRYZL1O95825 349 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 OR4E1P0C645 316 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 BMI1P35226 326 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 RPL27AP46776 148 aaKnown RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 RPL8P62917 257 aaKnown RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 EXOSC2Q13868 293 aaKnown RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 PSG5Q15238 335 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 AARDQ4LEZ3 155 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 SLC35E3Q7Z769 313 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 CIARTQ8N365 385 aaPredicted RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 SLC35G3Q8N808 338 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF383Q8NA42 475 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 TMEM190Q8WZ59 177 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 PFDN2Q9UHV9 154 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 HILPDAQ9Y5L2 63 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 USP9YO00507 2555 aaPredicted RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 DSCAML1Q8TD84 2053 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 HLA-AP01891 365 aaKnown RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 HKR1P10072 659 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 VAMP1P23763 118 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 RAB11AP62491 216 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 TMEM187Q14656 261 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 PHLDA2Q53GA4 152 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 PDLIM3Q53GG5 364 aaPredicted RBP4.15□□□□□ -1.74
LRIT3-201ENST00000327908 TMED4Q7Z7H5 227 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 OR4X2Q8NGF9 303 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 DCUN1D4Q92564 292 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 USMG5Q96IX5 58 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 RAB40CQ96S21 281 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 HIPK2Q9H2X6 1198 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 KCNIP2Q9NS61 270 aa4.15□□□□□ -1.74
LRIT3-201ENST00000327908 ZNF581Q9P0T4 197 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms