RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 NDUFB11Q9NX14 153 aa13.58□□□□□ -0.24
PTPMT1-201ENST00000326656 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 GNB3P16520 340 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 MYL9P24844 172 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 PLA2G7Q13093 441 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 SSX1Q16384 188 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 TATDN3Q17R31 274 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 MUC7Q8TAX7 377 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 GINS4Q9BRT9 223 aa13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 RBM7Q9Y580 266 aaKnown RBP13.57□□□□□ -0.24
PTPMT1-201ENST00000326656 H0Y980 276 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 CTXN2P0C2S0 81 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 RAB3BP20337 219 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 DTYMKP23919 212 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 UBE2KP61086 200 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 ARFRP1Q13795 201 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 VMA21Q3ZAQ7 101 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 ZNF343Q6P1L6 599 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 OVCH2Q7RTZ1 564 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 H1FOOQ8IZA3 346 aaPredicted RBP13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 BVESQ8NE79 360 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 OSR1Q8TAX0 266 aaPredicted RBP13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 DDB2Q92466 427 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 SIGLEC8Q9NYZ4 499 aa13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 PEF1Q9UBV8 284 aaKnown RBP13.56□□□□□ -0.24
PTPMT1-201ENST00000326656 TNCP24821 2201 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 DUTP33316 252 aaKnown RBP13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 OR10A3P58181 314 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 PRSS8Q16651 343 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 Q8N1Y9 231 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 OR9G4Q8NGQ1 327 aa13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 ZNF230Q9UIE0 474 aaPredicted RBP13.55□□□□□ -0.24
PTPMT1-201ENST00000326656 SHISA3A0PJX4 238 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 MSGN1A6NI15 193 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 CREBL2O60519 120 aaPredicted RBP13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 SLC22A5O76082 557 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 SGPP2Q8IWX5 399 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 DCSTAMPQ9H295 470 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 C19orf73Q9NVV2 129 aa13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 HUWE1Q7Z6Z7 4374 aaKnown RBP13.54□□□□□ -0.24
PTPMT1-201ENST00000326656 A0A075B6Q4 140 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 ANKRD34BA5PLL1 514 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 FGF9P31371 208 aaPredicted RBP13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 MRGPRG-AS1Q2M3A8 158 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 FAM209BQ5JX69 171 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 CASC10Q5T4H9 136 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 IZUMO2Q6UXV1 221 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 IL34Q6ZMJ4 242 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 ADAD2Q8NCV1 583 aaKnown RBP13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 SNAPC3Q92966 411 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 C5orf30Q96GV9 206 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 CNBD2Q96M20 576 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 PHB2Q99623 299 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 TM2D3Q9BRN9 247 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 RSRP1Q9BUV0 290 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 ATG5Q9H1Y0 275 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 COA4Q9NYJ1 87 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 RAB26Q9ULW5 256 aa13.53□□□□□ -0.24
PTPMT1-201ENST00000326656 SCGNO76038 276 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 OR2A4O95047 310 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 CRYZL1O95825 349 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 OR9G9P0C7N8 305 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 IGHV4-30-4P0DP06 118 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 GABARAPL2P60520 117 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 DYRK1AQ13627 763 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 CDNFQ49AH0 187 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 HACD4Q5VWC8 232 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 SRSF12Q8WXF0 261 aaKnown RBP13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 MAFIPQ8WZ33 124 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 CITED4Q96RK1 184 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 SPIN2AQ99865 258 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 SPIN2BQ9BPZ2 258 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 PRELID3BQ9Y3B1 194 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 OR2W1Q9Y3N9 320 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 DNAH7Q8WXX0 4024 aa13.52□□□□□ -0.25
PTPMT1-201ENST00000326656 A0A0B4J203 849 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 FAM223BA6NKX1 122 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 LINC00473A8K010 186 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 AIREO43918 545 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 ACTL6BO94805 426 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 HLA-DQB1P01920 261 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 SYNJ2BPP57105 145 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 CDK10Q15131 360 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 TNXAQ16473 311 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 C22orf42Q6IC83 251 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 TPRA1Q86W33 373 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 FAM223AQ8IWN6 122 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 MMD2Q8IY49 270 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 ZNF645Q8N7E2 425 aa13.51□□□□□ -0.25
PTPMT1-201ENST00000326656 IGKV1D-8A0A087WSZ0 117 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 MPPED1O15442 326 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 LYL1P12980 280 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 RPEL1Q2QD12 228 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
PTPMT1-201ENST00000326656 LCN12Q6JVE5 192 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms