RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 IGKV1-9A0A0C4DH69 117 aa16.48■□□□□ 0.23
TSR1-201ENST00000301364 HLA-DQA1P01909 254 aa16.48■□□□□ 0.23
TSR1-201ENST00000301364 TMEM30BQ3MIR4 351 aa16.48■□□□□ 0.23
TSR1-201ENST00000301364 IBA57Q5T440 356 aaKnown RBP16.48■□□□□ 0.23
TSR1-201ENST00000301364 NAGKQ9UJ70 344 aa16.48■□□□□ 0.23
TSR1-201ENST00000301364 RPL8P62917 257 aaKnown RBP16.47■□□□□ 0.23
TSR1-201ENST00000301364 HSPB8Q9UJY1 196 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 VENTXO95231 258 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 LINC00869P0C866 280 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 FAM209BQ5JX69 171 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 WDR25Q64LD2 544 aaPredicted RBP16.47■□□□□ 0.23
TSR1-201ENST00000301364 CBY3A6NI87 242 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 FAM157AC9JC47 383 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 REG1BP48304 166 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 ZDHHC8Q9ULC8 765 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 TCF19Q9Y242 345 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 TMEM56-RWDD3S4R434 201 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 RPL27AP46776 148 aaKnown RBP16.47■□□□□ 0.23
TSR1-201ENST00000301364 LGALS7P47929 136 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 ZNF343Q6P1L6 599 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 HSPB9Q9BQS6 159 aa16.47■□□□□ 0.23
TSR1-201ENST00000301364 ZNF703Q9H7S9 590 aaPredicted RBP16.47■□□□□ 0.23
TSR1-201ENST00000301364 GBF1Q92538 1859 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 CORTO00230 105 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 DLL1O00548 723 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 SRP19P09132 144 aaKnown RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 TMEM97Q5BJF2 176 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 ZNF385CQ66K41 422 aaPredicted RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 C19orf24Q9BVV8 132 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 HIGD1AQ9Y241 93 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 RSPO4Q2I0M5 234 aaPredicted RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 DOLPP1Q86YN1 238 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 OR8I2Q8N0Y5 310 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 SPSB4Q96A44 273 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 QTRT1Q9BXR0 403 aaKnown RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 H0YIZ8 118 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 CD99P14209 185 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 ATP5IP56385 69 aaPredicted RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 PET117Q6UWS5 81 aa16.46■□□□□ 0.23
TSR1-201ENST00000301364 AKIRIN1Q9H9L7 192 aaPredicted RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 MRPS18CQ9Y3D5 142 aaKnown RBP16.46■□□□□ 0.23
TSR1-201ENST00000301364 BMPR1BO00238 502 aa16.46■□□□□ 0.22
TSR1-201ENST00000301364 LRRC75BQ2VPJ9 315 aa16.46■□□□□ 0.22
TSR1-201ENST00000301364 KRTCAP3Q53RY4 240 aa16.46■□□□□ 0.22
TSR1-201ENST00000301364 FAM117AQ9C073 453 aa16.46■□□□□ 0.22
TSR1-201ENST00000301364 OR2T8A6NH00 312 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 IFNL4K9M1U5 179 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 ZNF25P17030 456 aaPredicted RBP16.45■□□□□ 0.22
TSR1-201ENST00000301364 DDTP30046 118 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 TIMP4Q99727 224 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 IDI2-AS1Q9NZ38 188 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 WASHC3Q9Y3C0 194 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 KIF26BQ2KJY2 2108 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 ARL14EPLP0DKL9 152 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 A0A087WWC5 75 aa16.45■□□□□ 0.22
TSR1-201ENST00000301364 LOC102723996A0A087X1L8 192 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 ZNF837Q96EG3 531 aaPredicted RBP16.44■□□□□ 0.22
TSR1-201ENST00000301364 KHDC1LQ5JSQ8 128 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 NKX2-8O15522 239 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 C8orf88P0DMB2 117 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 MMDQ15546 238 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 Q6ZT83 130 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 FAM222BQ8WU58 562 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 GGACTQ9BVM4 153 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 ZNF430Q9H8G1 570 aaPredicted RBP16.44■□□□□ 0.22
TSR1-201ENST00000301364 MMD2Q8IY49 270 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 OR10S1Q8NGN2 331 aa16.44■□□□□ 0.22
TSR1-201ENST00000301364 C18orf12Q96KH6 178 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 COA4Q9NYJ1 87 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 WDR81Q562E7 1941 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 PRSS1P07477 247 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 CYP2G1PQ6ZSU1 146 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 MRPL18Q9H0U6 180 aaKnown RBP16.43■□□□□ 0.22
TSR1-201ENST00000301364 HEATR5BQ9P2D3 2071 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 GOSR1O95249 250 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 COL5A1-AS1Q5SY13 56 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 GBGT1Q8N5D6 347 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 OR4B1Q8NGF8 309 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 IL17BQ9UHF5 180 aa16.43■□□□□ 0.22
TSR1-201ENST00000301364 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 LDLRAD4O15165 306 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 CCDC144NLQ6NUI1 221 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 SCNM1Q9BWG6 230 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 DNAJC4Q9NNZ3 241 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 ZNF319Q9P2F9 582 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 LYZL4Q96KX0 146 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 ZNF729A6NN14 1252 aaPredicted RBP16.42■□□□□ 0.22
TSR1-201ENST00000301364 SLC35B1P78383 322 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 FAM166AQ6J272 317 aa16.42■□□□□ 0.22
TSR1-201ENST00000301364 GTF3AQ92664 365 aaKnown RBP16.42■□□□□ 0.22
TSR1-201ENST00000301364 SNRNP40Q96DI7 357 aaKnown RBP16.42■□□□□ 0.22
TSR1-201ENST00000301364 A0A1W2PRD5 423 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 A0A1W2PRF3 423 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 A0A1W2PRM7 423 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 C12orf77C9JDV5 145 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 ABHD12Q8N2K0 398 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 CDC42EP3Q9UKI2 254 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 ZNF146Q15072 292 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 ABLIM2Q6H8Q1 611 aa16.41■□□□□ 0.22
TSR1-201ENST00000301364 LCN2P80188 198 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms