RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A23PA8MXZ1 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 VENTXO95231 258 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 PTTG1IPP53801 180 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 SUMO1P63165 101 aaKnown RBP12.34□□□□□ -0.43
COL6A2-201ENST00000300527 PLP2Q04941 152 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 C3AR1Q16581 482 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 COL5A1-AS1Q5SY13 56 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 MIC13Q5XKP0 118 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
COL6A2-201ENST00000300527 TUSC5Q8IXB3 177 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
COL6A2-201ENST00000300527 CDIPTO14735 213 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 ACTL6BO94805 426 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 DKK1O94907 266 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 OR2H2O95918 312 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 IGFBP4P22692 258 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 LTBRP36941 435 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 HINT1P49773 126 aaPredicted RBP12.33□□□□□ -0.44
COL6A2-201ENST00000300527 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 Q6ZS49 121 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 OR8I2Q8N0Y5 310 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 CCL4P13236 92 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 GNG3P63215 75 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 MRPS11P82912 194 aaKnown RBP12.33□□□□□ -0.44
COL6A2-201ENST00000300527 FXYD3Q14802 87 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 KRTCAP3Q53RY4 240 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 GGNQ86UU5 652 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 FAM19A2Q8N3H0 131 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 NINJ1Q92982 152 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 STARD4Q96DR4 205 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 HINT2Q9BX68 163 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 TP53TG3Q9ULZ0 132 aa12.33□□□□□ -0.44
COL6A2-201ENST00000300527 LRRC30A6NM36 301 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 PRDM14Q9GZV8 571 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 FBXL7Q9UJT9 491 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 WNT2P09544 360 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 HNRNPA3P51991 378 aaKnown RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 CARFQ8N187 725 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 GCM1Q9NP62 436 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 HEYLQ9NQ87 328 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 IGHV1-45A0A0A0MS14 117 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 RNPS1Q15287 305 aaKnown RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 MRPL54Q6P161 138 aaKnown RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 MRGPRDQ8TDS7 321 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 MRPS18CQ9Y3D5 142 aaKnown RBP12.32□□□□□ -0.44
COL6A2-201ENST00000300527 TIMM9Q9Y5J7 89 aa12.32□□□□□ -0.44
COL6A2-201ENST00000300527 PDE6DO43924 150 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 UMODP07911 640 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 GABRA2P47869 451 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 TBL2Q9Y4P3 447 aaKnown RBP12.31□□□□□ -0.44
COL6A2-201ENST00000300527 MED12LQ86YW9 2145 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 C20orf202A1L168 122 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 FAM166BA8MTA8 275 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 OR5G3P0C626 314 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 UHRF2Q96PU4 802 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 AESQ08117 197 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 STPG4Q8N801 248 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 SPSB4Q96A44 273 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 QTRT1Q9BXR0 403 aaKnown RBP12.31□□□□□ -0.44
COL6A2-201ENST00000300527 CACNA1EQ15878 2313 aa12.31□□□□□ -0.44
COL6A2-201ENST00000300527 PIGBOS1A0A0B4J2F0 54 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 MLNRO43193 412 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 COX6A1P12074 109 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 CD1BP29016 333 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 RANP62826 216 aaKnown RBP12.3□□□□□ -0.44
COL6A2-201ENST00000300527 C10orf142B7Z368 130 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 LINC00310P59036 64 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 ATP6V1FQ16864 119 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 TMEM144Q7Z5S9 345 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 LRFN3Q9BTN0 628 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 HSPB7Q9UBY9 170 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 PSG11Q9UQ72 335 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 WIPI2Q9Y4P8 454 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 CLDN14O95500 239 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 CELA3AP09093 270 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 SRD5A2P31213 254 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 TIMP3P35625 211 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 B3GALT5-AS1P59052 145 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 RPL31P62899 125 aaKnown RBP12.3□□□□□ -0.44
COL6A2-201ENST00000300527 PAFAH1B2P68402 229 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 RPP30P78346 268 aaKnown RBP12.3□□□□□ -0.44
COL6A2-201ENST00000300527 SLC35E1Q96K37 410 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 C20orf144Q9BQM9 153 aa12.3□□□□□ -0.44
COL6A2-201ENST00000300527 ZNF253O75346 499 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms