RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 WDR25Q64LD2 544 aaPredicted RBP20.85■□□□□ 0.93
ROM1-201ENST00000278833 LHX4Q969G2 390 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 YPEL2Q96QA6 119 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 MANBALQ9NQG1 85 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 GAB2Q9UQC2 676 aa20.85■□□□□ 0.93
ROM1-201ENST00000278833 GTF3C1Q12789 2109 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 F2RL2O00254 374 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 MGST3O14880 152 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 ZG16O60844 167 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 FGF8P55075 233 aaPredicted RBP20.84■□□□□ 0.93
ROM1-201ENST00000278833 ELLP55199 621 aaPredicted RBP20.84■□□□□ 0.93
ROM1-201ENST00000278833 CYP2G1PQ6ZSU1 146 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 TMPRSS5Q9H3S3 457 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 ITPR1Q14643 2758 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 CLDN34H7C241 214 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 NQO2P16083 231 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 DUTP33316 252 aaKnown RBP20.84■□□□□ 0.93
ROM1-201ENST00000278833 KIAA0141Q14154 515 aaPredicted RBP20.84■□□□□ 0.93
ROM1-201ENST00000278833 TMEM249Q2WGJ8 235 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 Q3ZCU0 254 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 OR2B11Q5JQS5 317 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 FAM53AQ6NSI3 398 aaPredicted RBP20.84■□□□□ 0.93
ROM1-201ENST00000278833 OR52E5Q8NH55 327 aa20.84■□□□□ 0.93
ROM1-201ENST00000278833 MARCH11A6NNE9 402 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 IGHV3-13P01766 116 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 FGF7P21781 194 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 MEF2BQ02080 365 aaPredicted RBP20.83■□□□□ 0.92
ROM1-201ENST00000278833 BTNL3Q6UXE8 466 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 SEM1Q6ZVN7 128 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 C1orf87Q8N0U7 546 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 OPN3Q9H1Y3 402 aaPredicted RBP20.83■□□□□ 0.92
ROM1-201ENST00000278833 NAT8Q9UHE5 227 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 PSG11Q9UQ72 335 aa20.83■□□□□ 0.92
ROM1-201ENST00000278833 CACNA1BQ00975 2339 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 TRBV24-1A0A075B6N3 115 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 IGKV1D-17A0A075B6S4 117 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 CEBPZOSA8MTT3 80 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 HPRT1P00492 218 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 EGR1P18146 543 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 CD81P60033 236 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 ZNF343Q6P1L6 599 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 IGFL3Q6UXB1 125 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 NPCDR1Q9BY65 106 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 NBEAQ8NFP9 2946 aa20.82■□□□□ 0.92
ROM1-201ENST00000278833 ST8SIA5O15466 376 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 KIR2DS2P43631 304 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 TIMM23BQ5SRD1 257 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 R3HDM4Q96D70 268 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 ACTR3CQ9C0K3 210 aaPredicted RBP20.81■□□□□ 0.92
ROM1-201ENST00000278833 C17orf112F2Z3M2 114 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 CLN5O75503 358 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 OPN1MWP04001 364 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 OPN1MW2P0DN77 364 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 OPN1MW3P0DN78 364 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 MORN2Q502X0 79 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 FZR1Q9UM11 496 aa20.81■□□□□ 0.92
ROM1-201ENST00000278833 C15orf62A8K5M9 175 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 KBTBD11O94819 623 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 TFF1P04155 84 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 GPR12P47775 334 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 DEFB109BQ30KR1 87 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 ZDHHC16Q969W1 377 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 GGACTQ9BVM4 153 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 PRORYQ9H606 182 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 RAB9BQ9NP90 201 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 WDR83OSQ9Y284 106 aa20.8■□□□□ 0.92
ROM1-201ENST00000278833 CD55P08174 381 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 CDX1P47902 265 aaPredicted RBP20.79■□□□□ 0.92
ROM1-201ENST00000278833 PSMB3P49720 205 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 HOXA4Q00056 320 aaPredicted RBP20.79■□□□□ 0.92
ROM1-201ENST00000278833 ZNF674Q2M3X9 581 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 GCSAMQ8N6F7 178 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 TPRX1Q8N7U7 411 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 OR2Z1Q8NG97 314 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 OR10G9Q8NGN4 311 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 OR10G7Q8NGN6 311 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 TGIF2-C20orf24A0A0A6YYL0 155 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 IGHV3-43A0A0B4J1X8 118 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 SEC14L6B5MCN3 397 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 PROP1O75360 226 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 LHBP01229 141 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 IGHV3-43DP0DP04 118 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 GLRXP35754 106 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 NKX6-1P78426 367 aaPredicted RBP20.79■□□□□ 0.92
ROM1-201ENST00000278833 NCR3LG1Q68D85 454 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 RAB1CQ92928 201 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 OR6C3Q9NZP0 311 aa20.79■□□□□ 0.92
ROM1-201ENST00000278833 MPDU1O75352 247 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 GATA4P43694 442 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 LOXL3P58215 753 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 SPCS3P61009 180 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 RPP30P78346 268 aaKnown RBP20.78■□□□□ 0.92
ROM1-201ENST00000278833 MSMPQ1L6U9 139 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 FFAR4Q5NUL3 377 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 ZADH2Q8N4Q0 377 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 Q8N7P7 452 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 NANPQ8TBE9 248 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 S100PBPQ96BU1 408 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 USF3Q68DE3 2245 aa20.78■□□□□ 0.92
ROM1-201ENST00000278833 IGLV3-9A0A075B6K5 115 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms