RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 APELAP0DMC3 54 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 CAMPP49913 170 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 SELENOTP62341 195 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 FAM166AQ6J272 317 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 ZNRF1Q8ND25 227 aa14.19□□□□□ -0.14
PHRF1-201ENST00000264555 CELA3BP08861 270 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 C9orf106Q8NAJ2 232 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 GTF3AQ92664 365 aaKnown RBP14.18□□□□□ -0.14
PHRF1-201ENST00000264555 PLXNA4Q9HCM2 1894 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 CCKARP32238 428 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 TCL1AP56279 114 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 ZNF385CQ66K41 422 aaPredicted RBP14.18□□□□□ -0.14
PHRF1-201ENST00000264555 MMD2Q8IY49 270 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 LEAP2Q969E1 77 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 PAXXQ9BUH6 204 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 IL36RNQ9UBH0 155 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 FUT9Q9Y231 359 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 TCF19Q9Y242 345 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 RNF115Q9Y4L5 304 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 DLL1O00548 723 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 GUCD1Q96NT3 240 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 TMEM56-RWDD3S4R434 201 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 S100A4P26447 101 aaKnown RBP14.18□□□□□ -0.14
PHRF1-201ENST00000264555 FGFBP3Q8TAT2 258 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 RAB24Q969Q5 203 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 TMUB1Q9BVT8 246 aa14.18□□□□□ -0.14
PHRF1-201ENST00000264555 A8MXK9 166 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 BMPERQ8N8U9 685 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 RNF126Q9BV68 326 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 PITPNC1Q9UKF7 332 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 CORTO00230 105 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 HYPMO75409 117 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 PTBP3O95758 552 aaKnown RBP14.17□□□□□ -0.14
PHRF1-201ENST00000264555 HTR1DP28221 377 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 PLAURQ03405 335 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 KIF26BQ2KJY2 2108 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 MIC13Q5XKP0 118 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 FAM216AQ8WUB2 273 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 PARD6AQ9NPB6 346 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 AURKAIP1Q9NWT8 199 aaPredicted RBP14.17□□□□□ -0.14
PHRF1-201ENST00000264555 P01737 135 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 USF1P22415 310 aaPredicted RBP14.17□□□□□ -0.14
PHRF1-201ENST00000264555 TRBV6-7A0A0A0MS04 114 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 NDUFB4O95168 129 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 FAM27E3Q08E93 113 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 OR1L6Q8NGR2 347 aa14.17□□□□□ -0.14
PHRF1-201ENST00000264555 FAM90A1Q86YD7 464 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 PLXNA2O75051 1894 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 GOSR1O95249 250 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 WNT5AP41221 380 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 FAM3BP58499 235 aaPredicted RBP14.16□□□□□ -0.14
PHRF1-201ENST00000264555 SSX7Q7RTT5 188 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 OR9G1Q8NH87 305 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 TMEM186Q96B77 213 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 PNRC2Q9NPJ4 139 aaKnown RBP14.16□□□□□ -0.14
PHRF1-201ENST00000264555 SLC31A2O15432 143 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 CD40P25942 277 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 PACRGQ96M98 296 aaPredicted RBP14.16□□□□□ -0.14
PHRF1-201ENST00000264555 IGHV3-72A0A0B4J1Y9 119 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 PROB1E7EW31 1015 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 H0YL77 283 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 FAM57AQ8TBR7 257 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 C18orf12Q96KH6 178 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 YTHDF2Q9Y5A9 579 aaKnown RBP14.16□□□□□ -0.14
PHRF1-201ENST00000264555 GFRA1P56159 465 aa14.16□□□□□ -0.14
PHRF1-201ENST00000264555 KBTBD11O94819 623 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 Q0VFX4 171 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 PQLC2Q6ZP29 291 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 OR4C13Q8NGP0 309 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 ZNF253O75346 499 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 HIST1H1EP10412 219 aaKnown RBP14.15□□□□□ -0.14
PHRF1-201ENST00000264555 SRP14P37108 136 aaKnown RBP14.15□□□□□ -0.14
PHRF1-201ENST00000264555 ZNF146Q15072 292 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 THADAQ6YHU6 1953 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 LOC102723971A0A1B0GUV8 181 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 LINC00869P0C866 280 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 HIST3H3Q16695 136 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 ABHD12Q8N2K0 398 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 OR13A1Q8NGR1 328 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 SGMS2Q8NHU3 365 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 TMEM171Q8WVE6 324 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 QTRT1Q9BXR0 403 aaKnown RBP14.15□□□□□ -0.14
PHRF1-201ENST00000264555 SPRR3Q9UBC9 169 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 METTL1Q9UBP6 276 aaKnown RBP14.15□□□□□ -0.14
PHRF1-201ENST00000264555 FREM3P0C091 2139 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 PAX6P26367 422 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 COL8A1P27658 744 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 HLA-DRB5Q30154 266 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 VKORC1L1Q8N0U8 176 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 OR8I2Q8N0Y5 310 aa14.15□□□□□ -0.14
PHRF1-201ENST00000264555 IGHV3-21A0A0B4J1V1 117 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 B9A039 149 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 ATP5IP56385 69 aaPredicted RBP14.14□□□□□ -0.15
PHRF1-201ENST00000264555 C1QTNF12Q5T7M4 302 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 PCGF1Q9BSM1 259 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 IGHV1-69-2A0A0G2JMI3 117 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 CXorf65A6NEN9 183 aa14.14□□□□□ -0.15
PHRF1-201ENST00000264555 CSRP1P21291 193 aaKnown RBP14.14□□□□□ -0.15
PHRF1-201ENST00000264555 PLPPR1Q8TBJ4 325 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms