RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 MAJINQ3KP22 176 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 FAM159AQ6UWV7 190 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 FBXL15Q9H469 300 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 NPIPB11E5RHQ5 1161 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 SUMO2P61956 95 aaKnown RBP13.59□□□□□ -0.23
SHANK3-201ENST00000262795 ZNF880Q6PDB4 577 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 ADAD2Q8NCV1 583 aaKnown RBP13.59□□□□□ -0.23
SHANK3-201ENST00000262795 PILRAQ9UKJ1 303 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 ELOBQ15370 118 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 ASCL4Q6XD76 172 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 WNT10AQ9GZT5 417 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 NDUFB6O95139 128 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 TMEM33P57088 247 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 B4DEV8 164 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 OR10J1P30954 320 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 PRSS22Q9GZN4 317 aa13.59□□□□□ -0.23
SHANK3-201ENST00000262795 CEACAM4O75871 244 aa13.58□□□□□ -0.23
SHANK3-201ENST00000262795 DLK1P80370 383 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 ZP4Q12836 540 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 GCSAMQ8N6F7 178 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.24
SHANK3-201ENST00000262795 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 TSPOP30536 169 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 PPP1R27Q86WC6 154 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 TMEM219Q86XT9 240 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 TMEM101Q96IK0 257 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 GPR82Q96P67 336 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 STRCP1A6NGW2 1772 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 PKIAP61925 76 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 C9orf106Q8NAJ2 232 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 RCC2Q9P258 522 aaKnown RBP13.58□□□□□ -0.24
SHANK3-201ENST00000262795 KIF13BQ9NQT8 1826 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 SSC4DQ8WTU2 575 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 CBLN4Q9NTU7 201 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 C19orf67A6NJJ6 358 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 CLDN34H7C241 214 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 M0QZK8 103 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 GGCTO75223 188 aaKnown RBP13.58□□□□□ -0.24
SHANK3-201ENST00000262795 TMEM50BP56557 158 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 LYZL2Q7Z4W2 148 aa13.58□□□□□ -0.24
SHANK3-201ENST00000262795 MOSP00540 346 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 DEGS2Q6QHC5 323 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 C1QL2Q7Z5L3 287 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 SLC17A5Q9NRA2 495 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 C1QL1O75973 258 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 LINC00869P0C866 280 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 OR4C45A6NMZ5 311 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 PRR32B1ATL7 298 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 PAGE4O60829 102 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 LMX1BO60663 402 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 THBDP07204 575 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 EIF3GO75821 320 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHANK3-201ENST00000262795 ANOS1P23352 680 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 C12orf73Q69YU5 71 aa13.57□□□□□ -0.24
SHANK3-201ENST00000262795 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 KLF7O75840 302 aaPredicted RBP13.56□□□□□ -0.24
SHANK3-201ENST00000262795 CELA3BP08861 270 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 HIST3H3Q16695 136 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF385CQ66K41 422 aaPredicted RBP13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF600Q6ZNG1 722 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ABCA7Q8IZY2 2146 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 HPRT1P00492 218 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 CTSDP07339 412 aaPredicted RBP13.56□□□□□ -0.24
SHANK3-201ENST00000262795 FUT9Q9Y231 359 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 A0A1B0GV90 55 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ODAMA1E959 279 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 FXYD1O00168 92 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 PGA4P0DJD7 388 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 CRYBA2P53672 197 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 HLA-DRB5Q30154 266 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 GATA4P43694 442 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 ERVK11-1P61568 191 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 BEX4Q9NWD9 120 aaPredicted RBP13.56□□□□□ -0.24
SHANK3-201ENST00000262795 COL18A1P39060 1754 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 COL22A1Q8NFW1 1626 aaPredicted RBP13.56□□□□□ -0.24
SHANK3-201ENST00000262795 EFNB2P52799 333 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 Q96MF0 132 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 FBXL7Q9UJT9 491 aa13.56□□□□□ -0.24
SHANK3-201ENST00000262795 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 MPC2O95563 127 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 MUC21Q5SSG8 566 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 IL17RELQ6ZVW7 336 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 CRPP02741 224 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 OR9G1Q8NH87 305 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF362Q5T0B9 420 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 MMD2Q8IY49 270 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 ZNF703Q9H7S9 590 aaPredicted RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 KLHDC2Q9Y2U9 406 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 TSPAN2O60636 221 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 CECR9P0C854 216 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 CSRP1P21291 193 aaKnown RBP13.55□□□□□ -0.24
SHANK3-201ENST00000262795 Q0VFX4 171 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
SHANK3-201ENST00000262795 PGLYRP4Q96LB8 373 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms