RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ZDHHC11Q9H8X9 412 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 HES4Q9HCC6 221 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PARD6AQ9NPB6 346 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 H0Y8G0 127 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PAGE4O60829 102 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PCP4P48539 62 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 EDDM3BP56851 147 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PPP1CBP62140 327 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 FGFRL1Q8N441 504 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 RFESDQ8TAC1 157 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 RAB40CQ96S21 281 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 PPIAL4AQ9Y536 164 aa8.48□□□□□ -1.05
COPB1-201ENST00000249923 DEFB108AA8MXU0 73 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 TCF21O43680 179 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 LRRC75BQ2VPJ9 315 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 HES3Q5TGS1 186 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 DPPA3Q6W0C5 159 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
COPB1-201ENST00000249923 COQ2Q96H96 371 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 OR4C12Q96R67 309 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 TBX15Q96SF7 602 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
COPB1-201ENST00000249923 A0A087WWC5 75 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 PMS2P5A8MQ11 134 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 C12orf77C9JDV5 145 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 SP9P0CG40 484 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 COL8A2P25067 703 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 TCF23Q7RTU1 214 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 TPRX1Q8N7U7 411 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 OR52L2PQ8NGH6 319 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 OR51G1Q8NGK1 321 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 IMMP2LQ96T52 175 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 PITPNC1Q9UKF7 332 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
COPB1-201ENST00000249923 A0A1W2PPV4 95 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 TNFSF15O95150 251 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 AMBPP02760 352 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 GRPP07492 148 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 TCL1AP56279 114 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 GUSBP1Q15486 140 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 DEFB123Q8N688 67 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 OR1P1Q8NH06 330 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 WDR61Q9GZS3 305 aaKnown RBP8.46□□□□□ -1.05
COPB1-201ENST00000249923 TMEM9BQ9NQ34 198 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 ARFGEF3Q5TH69 2177 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 AGFG2O95081 481 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 BCL2P10415 239 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 G6PCP35575 357 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 AESQ08117 197 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 DMRTA1Q5VZB9 504 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 ACSM6Q6P461 480 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 TMEM14EPQ6UXP3 125 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 ATOH7Q8N100 152 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 MBD3L1Q8WWY6 194 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 TXN2Q99757 166 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 RTL8AQ9BWD3 113 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.05
COPB1-201ENST00000249923 KLF13Q9Y2Y9 288 aaPredicted RBP8.46□□□□□ -1.05
COPB1-201ENST00000249923 CSMD1Q96PZ7 3565 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 TRGV5A0A0B4J1U4 118 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 PMCHP20382 165 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 UTF1Q5T230 341 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 KLF14Q8TD94 323 aaPredicted RBP8.46□□□□□ -1.06
COPB1-201ENST00000249923 CLCF1Q9UBD9 225 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 FZR1Q9UM11 496 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 ZNF292O60281 2723 aa8.46□□□□□ -1.06
COPB1-201ENST00000249923 TTC28Q96AY4 2481 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 IGHV3-43A0A0B4J1X8 118 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 LINC00473A8K010 186 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 C17orf98A8MV24 154 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 IQCF6A8MYZ5 107 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 PROP1O75360 226 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 S1PR2O95136 353 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 NXPH2O95156 264 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 HAND1O96004 215 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 IGHV3-43DP0DP04 118 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 S100A7P31151 101 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 SSTR5P35346 364 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 MDH2P40926 338 aaKnown RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 OR3A1P47881 315 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 CD81P60033 236 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 HBG1P69891 147 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 HBG2P69892 147 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 TBC1D28Q2M2D7 210 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 SLC35E3Q7Z769 313 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 Q8N7P7 452 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 DCTN5Q9BTE1 182 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 OR2D2Q9H210 308 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 CISD1Q9NZ45 108 aaKnown RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 CLN8Q9UBY8 286 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 INTS1Q8N201 2190 aaKnown RBP8.45□□□□□ -1.06
COPB1-201ENST00000249923 KLRC4-KLRK1H3BQV0 150 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 M0R143 59 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 TNFRSF9Q07011 255 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 GABRA6Q16445 453 aa8.45□□□□□ -1.06
COPB1-201ENST00000249923 OR10G4Q8NGN3 311 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms