RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 NDUFB7P17568 137 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 DVL1P1P54792 670 aaPredicted RBP11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 VKORC1L1Q8N0U8 176 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 OR4C12Q96R67 309 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 SEC11CQ9BY50 192 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 GPR37O15354 613 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 CASP6P55212 293 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 CCL20P78556 96 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 FAM209BQ5JX69 171 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 RSG1Q9BU20 258 aa11.89□□□□□ -0.51
PRKAB1-201ENST00000229328 SAA2-SAA4A0A096LPE2 208 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 RBMXL2O75526 392 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 SAA2P0DJI9 122 aaPredicted RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 HOXA1P49639 335 aaPredicted RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 GNG10P50151 68 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 OR2B8PP59922 312 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 OR8G2PQ6IF36 304 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 TMEM14EPQ6UXP3 125 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 SVBPQ8N300 66 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 CD300LFQ8TDQ1 290 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 EGLN1Q9GZT9 426 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 IDI2-AS1Q9NZ38 188 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 TPRP12270 2363 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 UMAD1C9J7I0 102 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 IFNA5P01569 189 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 GUK1Q16774 197 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 SLC25A24Q6NUK1 477 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 CLRN3Q8NCR9 226 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 ST6GALNAC3Q8NDV1 305 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 CORO2AQ92828 525 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 ZNF251Q9BRH9 671 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 QTRT1Q9BXR0 403 aaKnown RBP11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 LAMP3Q9UQV4 416 aa11.88□□□□□ -0.51
PRKAB1-201ENST00000229328 PPIAL4EA0A075B759 164 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 TRAV38-1A0A0B4J264 116 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 ZNF729A6NN14 1252 aaPredicted RBP11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 PPIAL4DF5H284 164 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 HPRT1P00492 218 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 PPIAL4FP0DN26 164 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 DTD1Q8TEA8 209 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 DDB2Q92466 427 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 LINC00574Q9H8X3 128 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 TMEM106BQ9NUM4 274 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 SLC25A10Q9UBX3 287 aaPredicted RBP11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 PPIAL4AQ9Y536 164 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 VSTM5A8MXK1 200 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 ITGB1BP1O14713 200 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 SIAH2O43255 324 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 LYG1Q8N1E2 194 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
PRKAB1-201ENST00000229328 YLPM1P49750 1951 aaKnown RBP11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 CD3EP07766 207 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 NPBWR1P48145 328 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 PPT1P50897 306 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 RAB7AP51149 207 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 HBG1P69891 147 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 HBG2P69892 147 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 ADORA2A-AS1P86434 159 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 SLC38A11Q08AI6 406 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 S1PR3Q99500 378 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 EIF5A2Q9GZV4 153 aaKnown RBP11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 HCFC1P51610 2035 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 CHRNB4P30926 498 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 COMMD1Q8N668 190 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 VSIRQ9H7M9 311 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 RAB9BQ9NP90 201 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 RPUSD1Q9UJJ7 312 aaKnown RBP11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
PRKAB1-201ENST00000229328 ITPR1Q14643 2758 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 TNFRSF13BO14836 293 aaPredicted RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 CCL3L1P16619 93 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 APOBEC3AP31941 199 aaPredicted RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 MRPS11P82912 194 aaKnown RBP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 LRRC75BQ2VPJ9 315 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 C1orf87Q8N0U7 546 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 SCGB1C1Q8TD33 95 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 LINC00312Q9Y6C7 94 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 LRBAP50851 2863 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 CEBPZOSA8MTT3 80 aa11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 RBFOX2O43251 390 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRKAB1-201ENST00000229328 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms