RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 DIRC2Q96SL1 478 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 GGACTQ9BVM4 153 aa18.26■□□□□ 0.51
SMARCD2-201ENST00000225742 GATA4P43694 442 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 RAB7AP51149 207 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 ERVK-16P61578 105 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 MSMPQ1L6U9 139 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 ACOT6Q3I5F7 207 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 ZNF343Q6P1L6 599 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 CYP2G1PQ6ZSU1 146 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 LRP11Q86VZ4 500 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 OR2V2Q96R30 315 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 QTRT1Q9BXR0 403 aaKnown RBP18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 TMPRSS5Q9H3S3 457 aa18.25■□□□□ 0.51
SMARCD2-201ENST00000225742 IGLV3-9A0A075B6K5 115 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 C15orf62A8K5M9 175 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 OPN1MWP04001 364 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 OPN1MW2P0DN77 364 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 OPN1MW3P0DN78 364 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 HOXA5P20719 270 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 TIMP3P35625 211 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 LOXL3P58215 753 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 CD81P60033 236 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 ZNF474Q6S9Z5 364 aaPredicted RBP18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 FAM180AQ6UWF9 173 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 OR4A16Q8NH70 328 aa18.24■□□□□ 0.51
SMARCD2-201ENST00000225742 FCGR3BO75015 233 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 MPDU1O75352 247 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 KBTBD11O94819 623 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 OR9G9P0C7N8 305 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 TMEM249Q2WGJ8 235 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 Q6ZS92 163 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 FAM222BQ8WU58 562 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 WDR83OSQ9Y284 106 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 BDP1A6H8Y1 2624 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 INTS1Q8N201 2190 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 USF3Q68DE3 2245 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 TGIF2-C20orf24A0A0A6YYL0 155 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 M0R1X1 148 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 PROP1O75360 226 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 CGB3P0DN86 165 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 CGB7P0DN87 165 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 TFF3Q07654 80 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 TMEM241Q24JQ0 296 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 PRAMEF5Q5TYX0 476 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 MOGAT3Q86VF5 341 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 SLC25A22Q9H936 323 aa18.23■□□□□ 0.51
SMARCD2-201ENST00000225742 CRYABP02511 175 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 LTC4SQ16873 150 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 FAM210BQ96KR6 192 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 S1PR3Q99500 378 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 SMIM7Q9BQ49 75 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 SFXN3Q9BWM7 321 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 CALYQ9NYX4 217 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 FAM215AQ9Y5M1 114 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 URGCP-MRPS24S4R325 110 aa18.22■□□□□ 0.51
SMARCD2-201ENST00000225742 TRBV24-1A0A075B6N3 115 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 SMCO3A2RU48 225 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 SEC14L6B5MCN3 397 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 RAB24Q969Q5 203 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 IFI27L2Q9H2X8 130 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 HEATR1Q9H583 2144 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 IGHV3OR15-7A0A075B7D8 119 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 CD1BP29016 333 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 CDX1P47902 265 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 SELENOVP59797 346 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 CTAG1AP78358 180 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 TMEM30BQ3MIR4 351 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 NANPQ8TBE9 248 aa18.21■□□□□ 0.51
SMARCD2-201ENST00000225742 ATXN7O15265 892 aaPredicted RBP18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 CLN5O75503 358 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 TMPRSS3P57727 454 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 LINC00205P59089 165 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 RTP5Q14D33 572 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 OR4S2Q8NH73 311 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 ITLN1Q8WWA0 313 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 RAB1CQ92928 201 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 RNF7Q9UBF6 113 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 COL6A3P12111 3177 aa18.2■□□□□ 0.5
SMARCD2-201ENST00000225742 VDAC2P45880 294 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 DDB2Q92466 427 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 SDSLQ96GA7 329 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 GFOD1Q9NXC2 390 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 FREM2Q5SZK8 3169 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 SPRY3O43610 288 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 CDC34P49427 236 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 EDDM3BP56851 147 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 B2MP61769 119 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 RELBQ01201 579 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 SLC16A13Q7RTY0 426 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 ADTRPQ96IZ2 230 aa18.19■□□□□ 0.5
SMARCD2-201ENST00000225742 CACNA1DQ01668 2161 aa18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 ELOA3CA0A087WX78 387 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 TRGV8A0A0C4DH27 118 aa18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 CEACAM8P31997 349 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 SPINK9Q5DT21 86 aa18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 ZNRF1Q8ND25 227 aa18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 NEIL1Q96FI4 390 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 FAM234AQ9H0X4 552 aa18.18■□□□□ 0.5
SMARCD2-201ENST00000225742 DOK5Q9P104 306 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms