RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 C16orf82Q7Z2V1 217 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 TMEM204Q9BSN7 226 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 QTRT1Q9BXR0 403 aaKnown RBP12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 NKX6-3A6NJ46 265 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 A8MXE2 369 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 HPRT1P00492 218 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 RPL39P5Q59GN2 51 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 OR10A7Q8NGE5 316 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF320A2RRD8 509 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 C5orf52A6NGY3 159 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 CEACAM1P13688 526 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 DBX2Q6ZNG2 339 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 P2RX4Q99571 388 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 AQP7O14520 342 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 PRRG2O14669 202 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 AGAP20933 346 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 RHOVQ96L33 236 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 SSX3Q99909 188 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 APC2O95996 2303 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 KIAA1324LA8MWY0 1029 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 TSTD3H0UI37 97 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 CLN5O75503 358 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 DEFA4P12838 97 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 EGR1P18146 543 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 RAB7AP51149 207 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 LRFN3Q9BTN0 628 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 GPR61Q9BZJ8 451 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 COA4Q9NYJ1 87 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 A0A1B0GW64 132 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 F6UZH7 168 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 RTL8BQ17RB0 113 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 ACSF3Q4G176 576 aaPredicted RBP12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 HEPN1Q6WQI6 88 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 CISD2Q8N5K1 135 aaKnown RBP12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 TCTEX1D1Q8N7M0 179 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 LURAP1Q96LR2 239 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 CTDSP1Q9GZU7 261 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 IFNL4K9M1U5 179 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 OR7C2O60412 319 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 CLCF1Q9UBD9 225 aa12.53□□□□□ -0.4
UBE2D4-201ENST00000222402 ABCA1O95477 2261 aa12.52□□□□□ -0.4
UBE2D4-201ENST00000222402 CXCL1P09341 107 aa12.52□□□□□ -0.4
UBE2D4-201ENST00000222402 PARLQ9H300 379 aa12.52□□□□□ -0.4
UBE2D4-201ENST00000222402 MBNL3Q9NUK0 354 aaKnown RBP12.52□□□□□ -0.4
UBE2D4-201ENST00000222402 RNF7Q9UBF6 113 aa12.52□□□□□ -0.4
UBE2D4-201ENST00000222402 BDP1A6H8Y1 2624 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 HRASP01112 189 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 APOA2P02652 100 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 ELOBQ15370 118 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 COQ2Q96H96 371 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 CALYQ9NYX4 217 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 OTOGLQ3ZCN5 2332 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 ENSAO43768 121 aaKnown RBP12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 GYPAP02724 150 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 CCL8P80075 99 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 RPP25LQ8N5L8 163 aaKnown RBP12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 CCL13Q99616 98 aa12.52□□□□□ -0.41
UBE2D4-201ENST00000222402 A0A087WWC5 75 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 UBE2CO00762 179 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 SPCS3P61009 180 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 LRP11Q86VZ4 500 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 TRGC1P0CF51 173 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 HTD2P86397 168 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 MIC13Q5XKP0 118 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 IGHV1-18A0A0C4DH31 117 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 ERVK11-1P61568 191 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 B2MP61769 119 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 SDF2L1Q9HCN8 221 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 TUBG2Q9NRH3 451 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 TMEM140Q9NV12 185 aa12.51□□□□□ -0.41
UBE2D4-201ENST00000222402 XKRY2A2RUG3 117 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 FAM157AC9JC47 383 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 MKRN2OSH3BPM6 223 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 NPY1RP25929 384 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 PAX6P26367 422 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 MBD3L1Q8WWY6 194 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 RND1Q92730 232 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 PHOX2AO14813 284 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 KBTBD11O94819 623 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 NDUFB4O95168 129 aa12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
UBE2D4-201ENST00000222402 RTP5Q14D33 572 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms