RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 HRASP01112 189 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 APOA2P02652 100 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 LIPFP07098 398 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 HKR1P10072 659 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 S100A1P23297 94 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 RAB13P51153 203 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 PRRX1P54821 245 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 ERVFRD-1P60508 538 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 EXOSC2Q13868 293 aaKnown RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF266Q14584 549 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF273Q14593 569 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 CT45A1Q5HYN5 189 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 WDR25Q64LD2 544 aaPredicted RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 DUX4L9Q6RFH8 374 aaPredicted RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 LYPD2Q6UXB3 125 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 H2BFWTQ7Z2G1 175 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 STX12Q86Y82 276 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 LYG1Q8N1E2 194 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 OR2C3Q8N628 320 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 KIR3DL3Q8N743 410 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 CT45A3Q8NHU0 189 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 SLC25A32Q9H2D1 315 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 LYRM2Q9NU23 88 aaPredicted RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 CACNG5Q9UF02 275 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 RCL1Q9Y2P8 373 aaKnown RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 YLPM1P49750 1951 aaKnown RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 ADGRG4Q8IZF6 3080 aa8□□□□□ -1.13
PHGDH-215ENST00000641371 GCN1Q92616 2671 aaKnown RBP8□□□□□ -1.13
PHGDH-215ENST00000641371 SAA2-SAA4A0A096LPE2 208 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 OVOL3O00110 214 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 NDUFS8O00217 210 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 DFFBO76075 338 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 IGKV1-39P01597 117 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 IGKV1-5P01602 117 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 IGKV1D-39P04432 117 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 FGF2P09038 288 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 P0C879 139 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 SAA2P0DJI9 122 aaPredicted RBP7.99□□□□□ -1.13
PHGDH-215ENST00000641371 IGHV1-8P0DP01 117 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 OMGP23515 440 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 HTR2BP41595 481 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 DLX6P56179 175 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 GNB2P62879 340 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 RPL30P62888 115 aaKnown RBP7.99□□□□□ -1.13
PHGDH-215ENST00000641371 RPP30P78346 268 aaKnown RBP7.99□□□□□ -1.13
PHGDH-215ENST00000641371 POU2AF1Q16633 256 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 PRAMEF5Q5TYX0 476 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF841Q6ZN19 808 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 C1orf122Q6ZSJ8 110 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF833PQ6ZTB9 187 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 FOXRED2Q8IWF2 684 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 OR8H3Q8N146 312 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 LY6G5BQ8NDX9 201 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 BEND2Q8NDZ0 799 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 OR10X1Q8NGY0 326 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 OR52E5Q8NH55 327 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 DDB2Q92466 427 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 R3HDM4Q96D70 268 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 SMIM8Q96KF7 97 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 TMEM133Q9H2Q1 129 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 C11orf1Q9H5F2 150 aa7.99□□□□□ -1.13
PHGDH-215ENST00000641371 IGSF10Q6WRI0 2623 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 PPIAL4CA0A0B4J2A2 164 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 MARCH11A6NNE9 402 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 LINC00473A8K010 186 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 C19orf84I3L1E1 186 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 J3QR06 171 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 SYNGR2O43760 224 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 FCGR3BO75015 233 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 S1PR2O95136 353 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 PPIAL4GP0DN37 164 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 EPHA1P21709 976 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 MC5RP33032 325 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 PDLIM4P50479 330 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF134P52741 427 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
PHGDH-215ENST00000641371 HBG1P69891 147 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 HBG2P69892 147 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF816Q0VGE8 651 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-215ENST00000641371 AARDQ4LEZ3 155 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 PDPNQ86YL7 162 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 UBAC2Q8NBM4 344 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 DMBX1Q8NFW5 382 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 OR13D1Q8NGV5 346 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 VSTM2AQ8TAG5 236 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 OSR1Q8TAX0 266 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-215ENST00000641371 MARVELD3Q96A59 401 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 C5orf30Q96GV9 206 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 SSBP3Q9BWW4 388 aaPredicted RBP7.98□□□□□ -1.13
PHGDH-215ENST00000641371 MED9Q9NWA0 146 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 HSPB7Q9UBY9 170 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 DOPEY1Q5JWR5 2465 aa7.98□□□□□ -1.13
PHGDH-215ENST00000641371 FLNBO75369 2602 aaKnown RBP7.98□□□□□ -1.13
PHGDH-215ENST00000641371 LOC105371242A0A075B767 164 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 LINC00862A6NCI5 91 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
PHGDH-215ENST00000641371 SSSCA1O60232 199 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms