RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 IGLV3-1P01715 115 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 PTGDSP41222 190 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 LTC4SQ16873 150 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 LYSMD4Q5XG99 296 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 MAFAQ8NHW3 353 aaPredicted RBP11.64□□□□□ -0.55
SCARB2-227ENST00000640957 APH1AQ96BI3 265 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 MTCH1Q9NZJ7 389 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 BOD1L1Q8NFC6 3051 aa11.64□□□□□ -0.55
SCARB2-227ENST00000640957 ZG16O60844 167 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 WNT2P09544 360 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 AMTP48728 403 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 TPPP2P59282 170 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 KRTCAP3Q53RY4 240 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 SPATA46Q5T0L3 261 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
SCARB2-227ENST00000640957 C19orf25Q9UFG5 118 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-227ENST00000640957 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-227ENST00000640957 PXMP4Q9Y6I8 212 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 CCL3P10147 92 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 RBX1P62877 108 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 FXYD3Q14802 87 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 CEACAM16Q2WEN9 425 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 SPACA9Q96E40 222 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-227ENST00000640957 SRXN1Q9BYN0 137 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 FGF23Q9GZV9 251 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-227ENST00000640957 CFAP47Q6ZTR5 3102 aa11.63□□□□□ -0.55
SCARB2-227ENST00000640957 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
SCARB2-227ENST00000640957 HIST3H3Q16695 136 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 LYG1Q8N1E2 194 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 RCHY1Q96PM5 261 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 UHRF2Q96PU4 802 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 MED12LQ86YW9 2145 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 A0A0J9YW62 118 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 MDFIC2A0A1B0GVS7 189 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 SOX8P57073 446 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 SIGLECL1Q8N7X8 197 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 CLDN23Q96B33 292 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 M0QZK8 103 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 LINC00614P0C842 121 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 SLC25A6P12236 298 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 CA6P23280 308 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 HNRNPA3P51991 378 aaKnown RBP11.62□□□□□ -0.55
SCARB2-227ENST00000640957 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 ZFP30Q9Y2G7 519 aa11.62□□□□□ -0.55
SCARB2-227ENST00000640957 SMG1Q96Q15 3661 aaKnown RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 F6UZH7 168 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 H0Y980 276 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 NGFP01138 241 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 MSX1P28360 303 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 FUT6P51993 359 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 SUMO1P63165 101 aaKnown RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 PCSK4Q6UW60 755 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 FGFRL1Q8N441 504 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 OCC1Q8TAD7 63 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 TBL2Q9Y4P3 447 aaKnown RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 IGHV5-10-1A0A0J9YXX1 117 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 RHBDL1O75783 438 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 CEBPDP49716 269 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 LHX2P50458 406 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 ZIC4Q8N9L1 334 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 WNT5BQ9H1J7 359 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 SYNGR3O43761 229 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 ANKRD39Q53RE8 183 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 MRPL54Q6P161 138 aaKnown RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 SSMEM1Q8WWF3 244 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 SFRP2Q96HF1 295 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 VPS25Q9BRG1 176 aa11.61□□□□□ -0.55
SCARB2-227ENST00000640957 ZNF552Q9H707 407 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-227ENST00000640957 DEFB108AA8MXU0 73 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 DUSP3P51452 185 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-227ENST00000640957 SERF2P84101 59 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 RELBQ01201 579 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 OR8I2Q8N0Y5 310 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 OR2W1Q9Y3N9 320 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 BDP1A6H8Y1 2624 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 C5orf49A4QMS7 147 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 NPIPB13A6NJU9 1138 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 NPIPB4C9JG80 1138 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 CA1P00915 261 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-227ENST00000640957 IGLV3-19P01714 112 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 PRDX4Q13162 271 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 ZNF585BQ52M93 769 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 AGMATQ9BSE5 352 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 LRFN3Q9BTN0 628 aa11.6□□□□□ -0.55
SCARB2-227ENST00000640957 CTXND1A0A1B0GTU2 59 aa11.59□□□□□ -0.55
SCARB2-227ENST00000640957 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
SCARB2-227ENST00000640957 CXCL13O43927 109 aa11.59□□□□□ -0.55
SCARB2-227ENST00000640957 S100GP29377 79 aa11.59□□□□□ -0.55
SCARB2-227ENST00000640957 LEMD1Q68G75 181 aa11.59□□□□□ -0.55
SCARB2-227ENST00000640957 RABEPKQ7Z6M1 372 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms