RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 IL17RELQ6ZVW7 336 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 TCF23Q7RTU1 214 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 MKXQ8IYA7 352 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SAXO1Q8IYX7 474 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SLC38A6Q8IZM9 456 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 FAM58AQ8N1B3 248 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF561Q8N587 486 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 CCDC71LQ8N9Z2 235 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 ZNRF1Q8ND25 227 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 LY6G5BQ8NDX9 201 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM104Q8NE00 496 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 OR4S1Q8NGB4 309 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 MARCH1Q8TCQ1 289 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 DCUN1D4Q92564 292 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SEC22AQ96IW7 307 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 CXorf58Q96LI9 332 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SPIN2AQ99865 258 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 SPIN2BQ9BPZ2 258 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 RTBDNQ9BSG5 229 aaPredicted RBP4.31□□□□□ -1.72
SHMT1-211ENST00000618902 PBDC1Q9BVG4 233 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 BIN3Q9NQY0 253 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 C19orf12Q9NSK7 152 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 OR14J1Q9UGF5 321 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 ANXA10Q9UJ72 324 aa4.31□□□□□ -1.72
SHMT1-211ENST00000618902 TRAV24A0A0B4J272 114 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 MEIS3P1A6NDR6 274 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 CRYM-AS1A6NIL9 109 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 F8W036 122 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 K7EPK0 472 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 K7N7A8 449 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 HSPA12AO43301 675 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SSX5O60225 188 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 NDUFS6O75380 124 aaKnown RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 HTR3BO95264 441 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 CDS2O95674 445 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 OR2H2O95918 312 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 HAND1O96004 215 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 IFNA4P05014 189 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 FOLR2P14207 255 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PVALBP20472 110 aaPredicted RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PRTN3P24158 256 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 P2RY1P47900 373 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 DLX6P56179 175 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 ERVFRD-1P60508 538 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 RAB2AP61019 212 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 FGF12P61328 243 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PAX5Q02548 391 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 MEF2CQ06413 473 aaPredicted RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 GNMTQ14749 295 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF146Q15072 292 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 MIDNQ504T8 468 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SPIN3Q5JUX0 258 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 AADACL3Q5VUY0 350 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 DPPA3Q6W0C5 159 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 LIAT1Q6ZQX7 453 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 LINC00596Q86U02 117 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 LGI3Q8N145 548 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 C11orf42Q8N5U0 333 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 Q8N7P7 452 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 TPRX1Q8N7U7 411 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 C15orf54Q8N8G6 183 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 BPIFCQ8NFQ6 507 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PPP1R35Q8TAP8 253 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 CASTOR1Q8WTX7 329 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SSMEM1Q8WWF3 244 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 NARS2Q96I59 477 aaKnown RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 TBX15Q96SF7 602 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 TCEAL7Q9BRU2 100 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 DCTN5Q9BTE1 182 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 ST6GALNAC5Q9BVH7 336 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PECRQ9BY49 303 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SLC5A7Q9GZV3 580 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 MS4A7Q9GZW8 240 aaPredicted RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 ARV1Q9H2C2 271 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 NCOR1P1Q9H4R4 102 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 BANF2Q9H503 90 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 TAF9BQ9HBM6 251 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SPACA1Q9HBV2 294 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 SMCO4Q9NRQ5 59 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 CYTL1Q9NRR1 136 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 UQCC1Q9NVA1 299 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 MLXQ9UH92 298 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 RPUSD1Q9UJJ7 312 aaKnown RBP4.3□□□□□ -1.72
SHMT1-211ENST00000618902 PRELID3BQ9Y3B1 194 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 CMYA5Q8N3K9 4069 aa4.3□□□□□ -1.72
SHMT1-211ENST00000618902 NOTCH1P46531 2555 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 IGHV3OR16-10A0A075B7F0 116 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 TRAV39A0A0B4J263 110 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 TMEM89A2RUT3 159 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ZNF705EA8MWA4 302 aaPredicted RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 RNASEK-C17orf49H0YIS7 233 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SIRPB1O00241 398 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SLC33A1O00400 549 aaPredicted RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 GEMIN2O14893 280 aaKnown RBP4.29□□□□□ -1.72
SHMT1-211ENST00000618902 SOCS1O15524 211 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 ST8SIA3O43173 380 aa4.29□□□□□ -1.72
SHMT1-211ENST00000618902 DEDDO75618 318 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms