RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LCE6AA0A183 80 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 ARL6IP5O75915 188 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 DIRAS3O95661 229 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 CDK1P06493 297 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 CBX3Q13185 183 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 SRSF7Q16629 238 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 CASTOR1Q8WTX7 329 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 SPATA25Q9BR10 227 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 TMED9Q9BVK6 235 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 VCXQ9H320 206 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 SCN3BQ9NY72 215 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 CSMD3Q7Z407 3707 aa13.66□□□□□ -0.22
SHKBP1-227ENST00000602011 TRDCB7Z8K6 153 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 SLC17A2O00624 439 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 SOCS1O15524 211 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 PROP1O75360 226 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 IFNA6P05013 189 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 SCTP09683 121 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 RRASP10301 218 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 PSMA1P25786 263 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 OR56B1Q8NGI3 324 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 OR4A4PQ8NGN8 299 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 OR9G4Q8NGQ1 327 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 CMSS1Q9BQ75 279 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 RSRP1Q9BUV0 290 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 PLGRKTQ9HBL7 147 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 OR1A1Q9P1Q5 309 aa13.65□□□□□ -0.22
SHKBP1-227ENST00000602011 HYDINQ4G0P3 5121 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 SLC25A17O43808 307 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 GNAO1P09471 354 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 MRPS15P82914 257 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 TPBGQ13641 420 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 INSL4Q14641 139 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 DRAXINQ8NBI3 349 aaPredicted RBP13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 GRPEL2Q8TAA5 225 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 UFD1Q92890 307 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 PARP12Q9H0J9 701 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 EDA2RQ9HAV5 297 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 SLC35D1Q9NTN3 355 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 RDH8Q9NYR8 311 aa13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 PEF1Q9UBV8 284 aaKnown RBP13.64□□□□□ -0.23
SHKBP1-227ENST00000602011 A0A0A6YYD4 124 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 FOXI3A8MTJ6 420 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 CASQ2O14958 399 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 TMEM50BP56557 158 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 LCN12Q6JVE5 192 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 ZNF343Q6P1L6 599 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 GTSCR1Q86UQ5 136 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 OR5T1Q8NG75 326 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 CYYR1Q96J86 154 aa13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 TINAGL1Q9GZM7 467 aaPredicted RBP13.63□□□□□ -0.23
SHKBP1-227ENST00000602011 PTGES3LE9PB15 166 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 M0R1X1 148 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 AIREO43918 545 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 CRYGBP07316 175 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 P2RY14Q15391 338 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 MED22Q15528 200 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 RAB11BQ15907 218 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 RTL8BQ17RB0 113 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 OGFRL1Q5TC84 451 aaPredicted RBP13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 ADAMTSL5Q6ZMM2 481 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 Q8N402 240 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 SNAPC3Q92966 411 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 ARHGAP5-AS1Q96IT6 56 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 ADTRPQ96IZ2 230 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 PECRQ9BY49 303 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 TUBA4BQ9H853 241 aa13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 LSM2Q9Y333 95 aaKnown RBP13.62□□□□□ -0.23
SHKBP1-227ENST00000602011 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 TEX45Q8NA69 505 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 OR10J5Q8NHC4 309 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 HDHD3Q9BSH5 251 aaPredicted RBP13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 PEMTQ9UBM1 199 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 RRP15Q9Y3B9 282 aaKnown RBP13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 TPRKBQ9Y3C4 175 aa13.61□□□□□ -0.23
SHKBP1-227ENST00000602011 A0A0B4J203 849 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 FABP7O15540 132 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 DENRO43583 198 aaKnown RBP13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 CREBL2O60519 120 aaPredicted RBP13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 OR2A4O95047 310 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 IGLV2-23P01705 113 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 CD3GP09693 182 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 C2orf76Q3KRA6 126 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 LIPKQ5VXJ0 399 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 IL34Q6ZMJ4 242 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 FAM3DQ96BQ1 224 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 HARBI1Q96MB7 349 aa13.6□□□□□ -0.23
SHKBP1-227ENST00000602011 IGKV1-6A0A0C4DH72 117 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 ANKRD34BA5PLL1 514 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 SHOXO15266 292 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 SYNJ2BPP57105 145 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 ARL6IP1Q15041 203 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 SSX1Q16384 188 aa13.59□□□□□ -0.23
SHKBP1-227ENST00000602011 HAGHQ16775 308 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms