RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 ZNF816Q0VGE8 651 aaPredicted RBP18.49■□□□□ 0.55
IRF3-227ENST00000600911 TGIF2LXQ8IUE1 241 aa18.49■□□□□ 0.55
IRF3-227ENST00000600911 ZBTB34Q8NCN2 500 aa18.49■□□□□ 0.55
IRF3-227ENST00000600911 RPEQ96AT9 228 aa18.49■□□□□ 0.55
IRF3-227ENST00000600911 SCGB3A2Q96PL1 93 aa18.49■□□□□ 0.55
IRF3-227ENST00000600911 NAA60Q9H7X0 242 aa18.49■□□□□ 0.55
IRF3-227ENST00000600911 MXRA5Q9NR99 2828 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 A0A1B0GVG6 124 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 RAMP3O60896 148 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 SLC22A5O76082 557 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 OR5AC1P0C628 307 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 SLC9A3R2Q15599 337 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 MINOS1Q5TGZ0 78 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 KCTD9Q7L273 389 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 CMTM1Q8IZ96 169 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 TCTEX1D2Q8WW35 142 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 CFHR4Q92496 578 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 MINOS1-NBL1R4GNA1 71 aa18.48■□□□□ 0.55
IRF3-227ENST00000600911 CD24P25063 80 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 F2RP25116 425 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 IL3RAP26951 378 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 DHRS2Q13268 280 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 ZNF585BQ52M93 769 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 TMEM128Q5BJH2 165 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 FAM71F2Q6NXP2 309 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 LHFPL5Q8TAF8 219 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 GHITMQ9H3K2 345 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 NUP50Q9UKX7 468 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 F8P00451 2351 aa18.47■□□□□ 0.55
IRF3-227ENST00000600911 H0YJW9 148 aa18.46■□□□□ 0.55
IRF3-227ENST00000600911 TIMM23O14925 209 aa18.46■□□□□ 0.55
IRF3-227ENST00000600911 RAB13P51153 203 aa18.46■□□□□ 0.55
IRF3-227ENST00000600911 ZNF66Q6ZN08 573 aa18.46■□□□□ 0.55
IRF3-227ENST00000600911 NANPQ8TBE9 248 aa18.46■□□□□ 0.55
IRF3-227ENST00000600911 TEX13DA0A0J9YY54 714 aaPredicted RBP18.45■□□□□ 0.54
IRF3-227ENST00000600911 C3orf85A0A1B0GTC6 90 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 C9orf170A2RU37 121 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 IGKV1-39P01597 117 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 GAPDHP04406 335 aaKnown RBP18.45■□□□□ 0.54
IRF3-227ENST00000600911 IGKV1D-39P04432 117 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 TATDN3Q17R31 274 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 ANKRD55Q3KP44 614 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 CLEC9AQ6UXN8 241 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 Q6ZNX1 250 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 MOB3BQ86TA1 216 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 CCDC71LQ8N9Z2 235 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 MINDY2Q8NBR6 621 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 GLYATL2Q8WU03 294 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 MALSU1Q96EH3 234 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 RITA1Q96K30 269 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 HSD17B10Q99714 261 aaKnown RBP18.45■□□□□ 0.54
IRF3-227ENST00000600911 ALX4Q9H161 411 aaPredicted RBP18.45■□□□□ 0.54
IRF3-227ENST00000600911 ALG5Q9Y673 324 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 SFT2D2O95562 160 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 IGKV1-16P04430 117 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 VAMP1P23763 118 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 TMEM187Q14656 261 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 C4orf46Q504U0 113 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 LIN54Q6MZP7 749 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 OR5AN1Q8NGI8 311 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 CASTOR1Q8WTX7 329 aa18.45■□□□□ 0.54
IRF3-227ENST00000600911 ZNF48Q96MX3 618 aaPredicted RBP18.45■□□□□ 0.54
IRF3-227ENST00000600911 A0A0A6YYJ9 748 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 FCGR3BO75015 233 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 HLA-AP01891 365 aaKnown RBP18.44■□□□□ 0.54
IRF3-227ENST00000600911 FOSL1P15407 271 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 THBS3P49746 956 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 RAG2P55895 527 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 TAS2R31P59538 309 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 LYG2Q86SG7 212 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 GALNT14Q96FL9 552 aa18.44■□□□□ 0.54
IRF3-227ENST00000600911 CEACAM3P40198 252 aa18.43■□□□□ 0.54
IRF3-227ENST00000600911 DEFB112Q30KQ8 113 aa18.43■□□□□ 0.54
IRF3-227ENST00000600911 SGPP2Q8IWX5 399 aa18.43■□□□□ 0.54
IRF3-227ENST00000600911 SPAG16Q8N0X2 631 aa18.43■□□□□ 0.54
IRF3-227ENST00000600911 H0Y980 276 aa18.42■□□□□ 0.54
IRF3-227ENST00000600911 IL5P05113 134 aa18.42■□□□□ 0.54
IRF3-227ENST00000600911 HABP2Q14520 560 aaPredicted RBP18.42■□□□□ 0.54
IRF3-227ENST00000600911 SLC35D1Q9NTN3 355 aa18.42■□□□□ 0.54
IRF3-227ENST00000600911 S1PR2O95136 353 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 UCP1P25874 307 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 PIFOQ8TCI5 191 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 MS4A7Q9GZW8 240 aaPredicted RBP18.41■□□□□ 0.54
IRF3-227ENST00000600911 TMEM222Q9H0R3 208 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 C7orf66A4D0T2 115 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 CATR1Q13166 79 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 CBX3Q13185 183 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 C2orf68Q2NKX9 166 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 C9orf139Q6ZV77 190 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 OR8H3Q8N146 312 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 ZNF431Q8TF32 576 aaPredicted RBP18.41■□□□□ 0.54
IRF3-227ENST00000600911 MEGF9Q9H1U4 602 aa18.41■□□□□ 0.54
IRF3-227ENST00000600911 LIN7CQ9NUP9 197 aaKnown RBP18.41■□□□□ 0.54
IRF3-227ENST00000600911 NAV3Q8IVL0 2385 aa18.4■□□□□ 0.54
IRF3-227ENST00000600911 SRRM4A7MD48 611 aaKnown RBP18.4■□□□□ 0.54
IRF3-227ENST00000600911 VENTXO95231 258 aa18.4■□□□□ 0.54
IRF3-227ENST00000600911 CRYZL1O95825 349 aa18.4■□□□□ 0.54
IRF3-227ENST00000600911 DHFRP00374 187 aa18.4■□□□□ 0.54
IRF3-227ENST00000600911 IFNA2P01563 188 aa18.4■□□□□ 0.54
IRF3-227ENST00000600911 RPA2P15927 270 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms