RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 H1FOOQ8IZA3 346 aaPredicted RBP17.68■□□□□ 0.42
CCDC9-204ENST00000599398 FLYWCH2Q96CP2 140 aaKnown RBP17.68■□□□□ 0.42
CCDC9-204ENST00000599398 SLC25A38Q96DW6 304 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 DCSTAMPQ9H295 470 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 NECAP2Q9NVZ3 263 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 GAB2Q9UQC2 676 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 A3GALT2U3KPV4 340 aa17.68■□□□□ 0.42
CCDC9-204ENST00000599398 TRAV18A0A075B6X5 111 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 J3QRK9 145 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 FCN1O00602 326 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 DUS4LO95620 317 aaKnown RBP17.67■□□□□ 0.42
CCDC9-204ENST00000599398 PSMB8P28062 276 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 CDX1P47902 265 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-204ENST00000599398 RAB25P57735 213 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 LSM3P62310 102 aaKnown RBP17.67■□□□□ 0.42
CCDC9-204ENST00000599398 CX3CL1P78423 397 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 NDPQ00604 133 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 PSG5Q15238 335 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 DEFB136Q30KP8 78 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 ZNF660Q6AZW8 331 aaPredicted RBP17.67■□□□□ 0.42
CCDC9-204ENST00000599398 REC114Q7Z4M0 266 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 YIPF6Q96EC8 236 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 RAX2Q96IS3 184 aa17.67■□□□□ 0.42
CCDC9-204ENST00000599398 CCL24O00175 119 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 CTXN2P0C2S0 81 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 PPIFP30405 207 aaKnown RBP17.66■□□□□ 0.42
CCDC9-204ENST00000599398 CBX3Q13185 183 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 C5orf30Q96GV9 206 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 P2RX4Q99571 388 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 FBXO7Q9Y3I1 522 aa17.66■□□□□ 0.42
CCDC9-204ENST00000599398 SLC25A17O43808 307 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 SSX5O60225 188 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 SPDEFO95238 335 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 KLK15Q9H2R5 256 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 DIABLOQ9NR28 239 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 SPATA2Q9UM82 520 aa17.65■□□□□ 0.42
CCDC9-204ENST00000599398 A0A1W2PN81 502 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 CA2P00918 260 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 NFYAP23511 347 aaPredicted RBP17.64■□□□□ 0.41
CCDC9-204ENST00000599398 CHRNA7P36544 502 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 RTL8BQ17RB0 113 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 CNIH2Q6PI25 160 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 CROCCP3Q8IVE0 287 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 BVESQ8NE79 360 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 C4orf3Q8WVX3 66 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 HARBI1Q96MB7 349 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 ANXA10Q9UJ72 324 aa17.64■□□□□ 0.41
CCDC9-204ENST00000599398 A0A0A6YYH2 397 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 A6NJ64 397 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 TMEM127O75204 238 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 IGLV1-40P01703 118 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 RPS19P39019 145 aaKnown RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 LUMP51884 338 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 TAGLNQ01995 201 aaKnown RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 TMEM267Q0VDI3 215 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 PPP1R27Q86WC6 154 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 MINDY2Q8NBR6 621 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 FAM103A1Q9BTL3 118 aaKnown RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 GPR61Q9BZJ8 451 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 TPSG1Q9NRR2 321 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 AURKAIP1Q9NWT8 199 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-204ENST00000599398 OR2W1Q9Y3N9 320 aa17.63■□□□□ 0.41
CCDC9-204ENST00000599398 SHOXO15266 292 aa17.62■□□□□ 0.41
CCDC9-204ENST00000599398 ZNF562Q6V9R5 426 aa17.62■□□□□ 0.41
CCDC9-204ENST00000599398 MRAPQ8TCY5 172 aa17.62■□□□□ 0.41
CCDC9-204ENST00000599398 DPF1Q92782 380 aa17.62■□□□□ 0.41
CCDC9-204ENST00000599398 ADTRPQ96IZ2 230 aa17.62■□□□□ 0.41
CCDC9-204ENST00000599398 MCRIP2Q9BUT9 160 aaKnown RBP17.62■□□□□ 0.41
CCDC9-204ENST00000599398 FOXA2Q9Y261 457 aaPredicted RBP17.62■□□□□ 0.41
CCDC9-204ENST00000599398 DNAH3Q8TD57 4116 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 RRASP10301 218 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 EGR2P11161 476 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-204ENST00000599398 HOXD3P31249 432 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-204ENST00000599398 DUTP33316 252 aaKnown RBP17.61■□□□□ 0.41
CCDC9-204ENST00000599398 LGALS7P47929 136 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 RAB9AP51151 201 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 CRIP2P52943 208 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-204ENST00000599398 ARPC4P59998 168 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 GNB1P62873 340 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 UNQ5815/PRO19632Q6UWF5 114 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 ZNF645Q8N7E2 425 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 GVQW1Q8N7I0 195 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 TCTEX1D1Q8N7M0 179 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 ZNF491Q8N8L2 437 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 BEST4Q8NFU0 473 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 GRPEL2Q8TAA5 225 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 MYOZ3Q8TDC0 251 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 ARPC1AQ92747 370 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 UBE2E2Q96LR5 201 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 OR5B12Q96R08 314 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 AUNIPQ9H7T9 357 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 GNB4Q9HAV0 340 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 VSIG4Q9Y279 399 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 NUBP2Q9Y5Y2 271 aa17.61■□□□□ 0.41
CCDC9-204ENST00000599398 CNIH1O95406 144 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 IGLV2-23P01705 113 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 FXYD3Q14802 87 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 TMEM177Q53S58 311 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 ACTBL2Q562R1 376 aa17.6■□□□□ 0.41
CCDC9-204ENST00000599398 C19orf54Q5BKX5 351 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms