RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 C10orf35Q96D05 121 aa3□□□□□ -1.93
VMP1-205ENST00000587470 SEH1LQ96EE3 360 aa3□□□□□ -1.93
VMP1-205ENST00000587470 RNF170Q96K19 258 aa3□□□□□ -1.93
VMP1-205ENST00000587470 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
VMP1-205ENST00000587470 LINC00167Q96N53 147 aa3□□□□□ -1.93
VMP1-205ENST00000587470 OR5M11Q96RB7 305 aa3□□□□□ -1.93
VMP1-205ENST00000587470 ZNF184Q99676 751 aaPredicted RBP3□□□□□ -1.93
VMP1-205ENST00000587470 PDCD1LG2Q9BQ51 273 aa3□□□□□ -1.93
VMP1-205ENST00000587470 YTHDF1Q9BYJ9 559 aaKnown RBP3□□□□□ -1.93
VMP1-205ENST00000587470 VCX3BQ9H321 246 aa3□□□□□ -1.93
VMP1-205ENST00000587470 METTL17Q9H7H0 456 aaPredicted RBP3□□□□□ -1.93
VMP1-205ENST00000587470 FN3KRPQ9HA64 309 aa3□□□□□ -1.93
VMP1-205ENST00000587470 PLEKHA3Q9HB20 300 aa3□□□□□ -1.93
VMP1-205ENST00000587470 NRN1Q9NPD7 142 aa3□□□□□ -1.93
VMP1-205ENST00000587470 UFSP2Q9NUQ7 469 aa3□□□□□ -1.93
VMP1-205ENST00000587470 GHRLQ9UBU3 117 aa3□□□□□ -1.93
VMP1-205ENST00000587470 PIGLQ9Y2B2 252 aa3□□□□□ -1.93
VMP1-205ENST00000587470 EXOSC1Q9Y3B2 195 aaKnown RBP3□□□□□ -1.93
VMP1-205ENST00000587470 NOP16Q9Y3C1 178 aaKnown RBP3□□□□□ -1.93
VMP1-205ENST00000587470 LRRC42Q9Y546 428 aa3□□□□□ -1.93
VMP1-205ENST00000587470 NPTNQ9Y639 398 aa3□□□□□ -1.93
VMP1-205ENST00000587470 VWFP04275 2813 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 A0A1B0GVI7 797 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 IRGMA1A4Y4 181 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 XKRY2A2RUG3 117 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 OR5B21A6NL26 309 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TMEM210A6NLX4 147 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 LRRC30A6NM36 301 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TMEM212A6NML5 194 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 CEACAM18A8MTB9 384 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 CLDN25C9JDP6 229 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 CDIPTO14735 213 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 SYNGR1O43759 233 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 NOS1APO75052 506 aaPredicted RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 GPX5O75715 221 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 RHBDL1O75783 438 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 SC5DO75845 299 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 UBCP0CG48 685 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 CD37P11049 281 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ATF1P18846 271 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 MYL12AP19105 171 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 PCMT1P22061 227 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ID1P41134 155 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 MAP2K4P45985 399 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 GPM6AP51674 278 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 RAG2P55895 527 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 WNT4P56705 351 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 PAX2Q02962 417 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 MRPL28Q13084 256 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 TPBGQ13641 420 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 SNCBQ16143 134 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ZNF404Q494X3 552 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TMEM155Q4W5P6 130 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 RBM48Q5RL73 367 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 VAX1Q5SQQ9 334 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 FAM120AOSQ5T036 256 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TEX36Q5VZQ5 186 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 RPL22L1Q6P5R6 122 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 LYPD2Q6UXB3 125 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TMPRSS11AQ6ZMR5 421 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 Q6ZVH6 145 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 PRSS48Q7RTY5 328 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 FAM220AQ7Z4H9 259 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ANGPTL5Q86XS5 388 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 CALHM1Q8IU99 346 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 STX19Q8N4C7 294 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ZNF676Q8N7Q3 588 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ZFP41Q8N8Y5 198 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 C19orf18Q8NEA5 215 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 OR51A2Q8NGJ7 313 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 HAVCR2Q8TDQ0 301 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 AQP3Q92482 292 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 GHSRQ92847 366 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 RAB1CQ92928 201 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 SMIM19Q96E16 107 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 MRPL48Q96GC5 212 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 CNBD2Q96M20 576 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 MICU1Q9BPX6 476 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TMEM246Q9BRR3 403 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ADAT1Q9BUB4 502 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 CHST5Q9GZS9 411 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 Q9HAA7 133 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 PATZ1Q9HBE1 687 aaKnown RBP2.99□□□□□ -1.93
VMP1-205ENST00000587470 C1orf123Q9NWV4 160 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 THYN1Q9P016 225 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 KAAG1Q9UBP8 84 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 ENPP5Q9UJA9 477 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 HHLA2Q9UM44 414 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 SPATA2Q9UM82 520 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 TPRKBQ9Y3C4 175 aa2.99□□□□□ -1.93
VMP1-205ENST00000587470 IGKV1D-17A0A075B6S4 117 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 TRAV8-7A0A075B6U6 113 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 PPIAL4EA0A075B759 164 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 IGHV3OR15-7A0A075B7D8 119 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 PPIAL4CA0A0B4J2A2 164 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 IGKV1-12A0A0C4DH73 117 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 A0A1B0GW55 424 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 TRAPPC2LH3BP13 241 aa2.98□□□□□ -1.93
VMP1-205ENST00000587470 J3QT63 122 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms