RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 MED20Q9H944 212 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 PNRC2Q9NPJ4 139 aaKnown RBP5.13□□□□□ -1.59
SMAD4-203ENST00000585448 THAP10Q9P2Z0 257 aaPredicted RBP5.13□□□□□ -1.59
SMAD4-203ENST00000585448 CD207Q9UJ71 328 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF257Q9Y2Q1 563 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 KLHDC2Q9Y2U9 406 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 MED31Q9Y3C7 131 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 SPCS1Q9Y6A9 102 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 NUP98P52948 1817 aa5.13□□□□□ -1.59
SMAD4-203ENST00000585448 A0A087WX48 190 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 A0A0G2JLM5 398 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CENPVL3A0A0U1RRI6 287 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 LOC102725191A0A1B0GVB3 256 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 A0A1W2PPM0 123 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SMIM9A6NGZ8 99 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 GLOD5A6NK44 160 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SYNGR1O43759 233 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CER1O95813 267 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CA2P00918 260 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 HLA-DQA2P01906 255 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 DBIP07108 87 aaKnown RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CELA2AP08217 269 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CXCL8P10145 99 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 IGLL1P15814 213 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 HIST1H1DP16402 221 aaKnown RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 TM4SF1P30408 202 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SLC6A6P31641 620 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 GPR183P32249 361 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 HRH1P35367 487 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SGSHP51688 502 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SUPT4H1P63272 117 aaKnown RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 EWSR1Q01844 656 aaKnown RBP eCLIP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 RUNX3Q13761 415 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 IHHQ14623 411 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 IGFBP7Q16270 282 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 ASCL4Q6XD76 172 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM123Q8N131 208 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 FBXL14Q8N1E6 418 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF676Q8N7Q3 588 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 OR4F5Q8NH21 305 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 OR10D3Q8NH80 312 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 NEUROG1Q92886 237 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 APOBEC3DQ96AK3 386 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SDF2Q99470 211 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 KXD1Q9BQD3 176 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 PIMREGQ9BSJ6 248 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 SLC25A33Q9BSK2 321 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 NXF5Q9H1B4 397 aaKnown RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM133Q9H2Q1 129 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 FNDC4Q9H6D8 234 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 PRSS16Q9NQE7 514 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 ONECUT1Q9UBC0 465 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 CKLFQ9UBR5 152 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 RARRES3Q9UL19 164 aa5.12□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF443Q9Y2A4 671 aaPredicted RBP5.12□□□□□ -1.59
SMAD4-203ENST00000585448 PLXNA3P51805 1871 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM8BA6NDV4 472 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 CEBPZOSA8MTT3 80 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 FABP5P3A8MUU1 101 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 M0R2Z0 102 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 HMGN4O00479 90 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 CLDN5O00501 218 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 SH2D1BO14796 132 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 CEACAM4O75871 244 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 HPNP05981 417 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 OR9G9P0C7N8 305 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 CT45A10P0DMU9 189 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 HIST1H1EP10412 219 aaKnown RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 SLC25A6P12236 298 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 IGFBP2P18065 325 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 HTR1DP28221 377 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 PNPLA4P41247 253 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 PSMB3P49720 205 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 FABP6P51161 128 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 MRPS21P82921 87 aaKnown RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 TIMM23BQ5SRD1 257 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF684Q5T5D7 378 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM78Q5T7P6 136 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZFAND6Q6FIF0 208 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ACSM6Q6P461 480 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ADAMTSL5Q6ZMM2 481 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 Q6ZS92 163 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 H2BFWTQ7Z2G1 175 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 LHFPL1Q86WI0 220 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF547Q8IVP9 402 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZADH2Q8N4Q0 377 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 LRTM2Q8N967 370 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF439Q8NDP4 499 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 OR8B3Q8NGG8 313 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 ATP6V0E2Q8NHE4 81 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 MAFAQ8NHW3 353 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 RTN4IP1Q8WWV3 396 aaPredicted RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 OR5P3Q8WZ94 311 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 DAZLQ92904 295 aaKnown RBP5.11□□□□□ -1.59
SMAD4-203ENST00000585448 PIGTQ969N2 578 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 PERPQ96FX8 193 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 DNAJC30Q96LL9 226 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 OR8B2Q96RD0 313 aa5.11□□□□□ -1.59
SMAD4-203ENST00000585448 SPIN2AQ99865 258 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms