RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TNFSF12O43508 249 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 YPEL1O60688 119 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 TSC22D2O75157 780 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 IGHV2-5P01817 119 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 WNT2P09544 360 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 SLC25A4P12235 298 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 PRTN3P24158 256 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
SS18-207ENST00000577636 GPR12P47775 334 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 RPL31P62899 125 aaKnown RBP8.33□□□□□ -1.08
SS18-207ENST00000577636 LTC4SQ16873 150 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 LRRC37A5PQ49AS3 106 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 GGNBP1Q5YKI7 109 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 BCL6BQ8N143 479 aaPredicted RBP8.33□□□□□ -1.08
SS18-207ENST00000577636 TCTEX1D1Q8N7M0 179 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 OR10A7Q8NGE5 316 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 GLYATL2Q8WU03 294 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 RBPMSQ93062 196 aaKnown RBP8.33□□□□□ -1.08
SS18-207ENST00000577636 WDR89Q96FK6 387 aaPredicted RBP8.33□□□□□ -1.08
SS18-207ENST00000577636 TMEM56Q96MV1 263 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 YPEL2Q96QA6 119 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 MFFQ9GZY8 342 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 DCAF16Q9NXF7 216 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 PRR13Q9NZ81 148 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 CLN8Q9UBY8 286 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 TMEM56-RWDD3S4R434 201 aa8.33□□□□□ -1.08
SS18-207ENST00000577636 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 IGHV3-43A0A0B4J1X8 118 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 A0A0D9SG52 128 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 DNAJC9-AS1A6NH13 148 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 MPC2O95563 127 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 CDS2O95674 445 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 IGHV3-43DP0DP04 118 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 RPA2P15927 270 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 OMGP23515 440 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 UCP1P25874 307 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 S100A10P60903 97 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 TMEM65Q6PI78 240 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 ZNF66Q6ZN08 573 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 OR11H4Q8NGC9 324 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 OR52M1Q8NGK5 317 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 OR51H1Q8NH63 302 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 CD300LFQ8TDQ1 290 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 CORO2AQ92828 525 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
SS18-207ENST00000577636 TP53RKQ96S44 253 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 HSD17B10Q99714 261 aaKnown RBP8.32□□□□□ -1.08
SS18-207ENST00000577636 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 ZC4H2Q9NQZ6 224 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 IDI2-AS1Q9NZ38 188 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 RNF150Q9ULK6 438 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 PSG11Q9UQ72 335 aa8.32□□□□□ -1.08
SS18-207ENST00000577636 IGHV3OR16-10A0A075B7F0 116 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 DVL1O14640 695 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 OR2F2O95006 317 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 SELLP14151 372 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
SS18-207ENST00000577636 MDKP21741 143 aaPredicted RBP8.31□□□□□ -1.08
SS18-207ENST00000577636 VDAC1P21796 283 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 GATA3P23771 443 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 NFYBP25208 207 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 OR2F1Q13607 317 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 GNMTQ14749 295 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 MORN2Q502X0 79 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 Q5BKY6 102 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 LYZL2Q7Z4W2 148 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 OR8B3Q8NGG8 313 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 TCTEX1D2Q8WW35 142 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 DCUN1D4Q92564 292 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 ZNF714Q96N38 554 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 OR8B2Q96RD0 313 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 MS4A7Q9GZW8 240 aaPredicted RBP8.31□□□□□ -1.08
SS18-207ENST00000577636 PLSCR3Q9NRY6 295 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 NUP50Q9UKX7 468 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 ARHGAP32A7KAX9 2087 aa8.31□□□□□ -1.08
SS18-207ENST00000577636 A0A1B0GW55 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 KANTRA0A1W2PQU2 76 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 A0A1W2PR64 198 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 MEX3AA1L020 520 aaKnown RBP8.3□□□□□ -1.08
SS18-207ENST00000577636 RGS13O14921 159 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L2P0CJ85 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L3P0CJ86 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L4P0CJ87 422 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L5P0CJ88 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L6P0CJ89 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 DUX4L7P0CJ90 424 aa8.3□□□□□ -1.08
SS18-207ENST00000577636 S100A11P31949 105 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms