RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 C19orf54Q5BKX5 351 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 ZNF491Q8N8L2 437 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 MAFIPQ8WZ33 124 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 GINS4Q9BRT9 223 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 KLK15Q9H2R5 256 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 SDHAF2Q9NX18 166 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 NUBP2Q9Y5Y2 271 aa13.73□□□□□ -0.21
SMAD3-210ENST00000559092 TMEM127O75204 238 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 CTXN2P0C2S0 81 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 CD36P16671 472 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 LGALS7P47929 136 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 KRTAP10-11P60412 298 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 FHL3Q13643 280 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 AKIRIN2Q53H80 203 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 OR5M8Q8NGP6 311 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 OR2D2Q9H210 308 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 METTL1Q9UBP6 276 aaKnown RBP13.72□□□□□ -0.21
SMAD3-210ENST00000559092 ETV7Q9Y603 341 aa13.72□□□□□ -0.21
SMAD3-210ENST00000559092 LOC100506127A0A0U1RQW1 187 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 EGR2P11161 476 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 SNRPBP14678 240 aaKnown RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 LINC00205P59089 165 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 NDPQ00604 133 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 NEDD8Q15843 81 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 DEFB136Q30KP8 78 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 PYHIN1Q6K0P9 492 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 H1FOOQ8IZA3 346 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 ST6GALNAC5Q9BVH7 336 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
SMAD3-210ENST00000559092 ELF5Q9UKW6 265 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 FOXA2Q9Y261 457 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
SMAD3-210ENST00000559092 IGKV1D-8A0A087WSZ0 117 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 A0A0A6YYH2 397 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 A6NJ64 397 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 I3L521 148 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 RRASP10301 218 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 HOXD3P31249 432 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-210ENST00000559092 RAB25P57735 213 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 CBX3Q13185 183 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 TIMM50Q3ZCQ8 353 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 ZNF260Q3ZCT1 412 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 PPP1R27Q86WC6 154 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 OR11H1Q8NG94 326 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 LGALS14Q8TCE9 139 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 RHBDL2Q9NX52 303 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 FBXO7Q9Y3I1 522 aa13.7□□□□□ -0.22
SMAD3-210ENST00000559092 CD40LGP29965 261 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 GNG2P59768 71 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 MXD1Q05195 221 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 RTL8BQ17RB0 113 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 ECSCRQ19T08 205 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 TMEM177Q53S58 311 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 CNIH2Q6PI25 160 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 OR1N2Q8NGR9 330 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 ABHD5Q8WTS1 349 aa13.69□□□□□ -0.22
SMAD3-210ENST00000559092 A0A1W2PN81 502 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 TMEM235A6NFC5 223 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 K7EIL1 84 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 SLC25A17O43808 307 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 SOX15O60248 233 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 RAMP3O60896 148 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 SLC22A5O76082 557 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 CA2P00918 260 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 CLEC2LP0C7M8 214 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 OR8U8P0C7N1 319 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 CHRNA7P36544 502 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 LUMP51884 338 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-210ENST00000559092 ACTBL2Q562R1 376 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 IDNKQ5T6J7 187 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 CROCCP3Q8IVE0 287 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 CLCC1Q96S66 551 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 RNF167Q9H6Y7 350 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 GNB4Q9HAV0 340 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 VCX3AQ9NNX9 186 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
SMAD3-210ENST00000559092 A0A087WXM4 84 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 WI2-2373I1.2A0A1W2PRP0 233 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 IGLV2-23P01705 113 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 CRYGBP07316 175 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 DUTP33316 252 aaKnown RBP13.67□□□□□ -0.22
SMAD3-210ENST00000559092 DGCR2P98153 550 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 ZNF616Q08AN1 781 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 DCTN2Q13561 401 aaKnown RBP13.67□□□□□ -0.22
SMAD3-210ENST00000559092 FXYD3Q14802 87 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 UNQ5815/PRO19632Q6UWF5 114 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 LFNGQ8NES3 379 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 NUDCD2Q8WVJ2 157 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 DDB2Q92466 427 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 ARPC1AQ92747 370 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 C5orf30Q96GV9 206 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 OR2W1Q9Y3N9 320 aa13.67□□□□□ -0.22
SMAD3-210ENST00000559092 SHOXO15266 292 aa13.66□□□□□ -0.22
SMAD3-210ENST00000559092 TNFAIP8O95379 198 aa13.66□□□□□ -0.22
SMAD3-210ENST00000559092 CNIH1O95406 144 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms