RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 SLC13A5Q86YT5 568 aaPredicted RBP0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 BAP18Q8IXM2 172 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 C1orf174Q8IYL3 243 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 OTUD6BQ8N6M0 293 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 CLDND2Q8NHS1 167 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 Q96M85 177 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 MS4A12Q9NXJ0 267 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 SYNRGQ9UMZ2 1314 aa0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 NUP153P49790 1475 aaKnown RBP0.78□□□□□ -2.28
SUPT16H-206ENST00000556309 ROS1P08922 2347 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 RD3LP0DJH9 198 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 GPX2P18283 190 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 G6PCP35575 357 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 DAD1P61803 113 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 LCN8Q6JVE9 175 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 BLIDQ8IZY5 108 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 OR2D3Q8NGH3 330 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 RNASE6Q93091 150 aaKnown RBP0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 SMIM12Q96EX1 92 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 NMNAT3Q96T66 252 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 TTTY13Q9BZ97 58 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 NKX6-2Q9C056 277 aaPredicted RBP0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 EIF5A2Q9GZV4 153 aaKnown RBP0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 VCX3BQ9H321 246 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 ASCL3Q9NQ33 180 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 UBQLN4Q9NRR5 601 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 ZNHIT6Q9NWK9 470 aaKnown RBP0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 TAAR3PQ9P1P4 343 aa0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 SOX21Q9Y651 276 aaPredicted RBP0.77□□□□□ -2.29
SUPT16H-206ENST00000556309 HEATR5BQ9P2D3 2071 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 NPATQ14207 1427 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SYNGR1O43759 233 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 TPM1P09493 284 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SARNPP82979 210 aaKnown RBP0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 GNA12Q03113 381 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SMAGPQ0VAQ4 97 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 EXOC3L4Q17RC7 722 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SLC36A2Q495M3 483 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 OR10K2Q6IF99 312 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 COPS6Q7L5N1 327 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 LRRC34Q8IZ02 419 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 ATP6V1C2Q8NEY4 427 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SMCR5Q8TEV8 140 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 ZNF75CPQ92670 426 aaPredicted RBP0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SFRP2Q96HF1 295 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 OR7D2Q96RA2 312 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 C8orf4Q9NR00 106 aa0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 POLR3HQ9Y535 204 aaPredicted RBP0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 DIDO1Q9BTC0 2240 aaKnown RBP0.76□□□□□ -2.29
SUPT16H-206ENST00000556309 SIPA1L1O43166 1804 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 ZNF469Q96JG9 3925 aaPredicted RBP0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 IGKV2-40A0A087WW87 121 aaPredicted RBP0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 METTL15A6NJ78 407 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 FAM25EA8MYX2 175 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 M0R381 172 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 E2F6O75461 281 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 YEATS4O95619 227 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 NPYP01303 97 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 IGKV2D-40P01614 121 aaPredicted RBP0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CRPP02741 224 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 UCHL1P09936 223 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 DEFA4P12838 97 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CFL1P23528 166 aaKnown RBP0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CD24P25063 80 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 MSNP26038 577 aaKnown RBP0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 BLVRAP53004 296 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CTBP2P56545 445 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 NNATQ16517 81 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 LGALS9BQ3B8N2 356 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 AADACL4Q5VUY2 407 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 TMEM42Q69YG0 159 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 RNF133Q8WVZ7 376 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 TLCD1Q96CP7 247 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CENPHQ9H3R5 247 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 CFAP45Q9UL16 551 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 PTPRSQ13332 1948 aa0.75□□□□□ -2.29
SUPT16H-206ENST00000556309 REREQ9P2R6 1566 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 GRIN2BQ13224 1484 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 TMEM94Q12767 1356 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 MAP3K19Q56UN5 1328 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 IGHV3-64A0A075B6Q5 118 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 IGKV3D-7A0A0C4DH55 119 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 IGKV3OR2-268A0A0C4DH90 116 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 SMLR1H3BR10 107 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 COPEO14579 308 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 NEMFO60524 1076 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 ATP5G1P05496 136 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 IFNGR2P38484 337 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 CRATP43155 626 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 GABRA2P47869 451 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 H2BFSP57053 126 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 ZNHIT3Q15649 155 aaPredicted RBP0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 CCDC122Q5T0U0 273 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 KTN1-AS1Q86SY8 53 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 BOD1L2Q8IYS8 172 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 Q8WTZ3 238 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 PPCDCQ96CD2 204 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms