RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LEMD1Q68G75 181 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 SAP25Q8TEE9 199 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 TM2D1Q9BX74 207 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 WDR54Q9H977 334 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 COA4Q9NYJ1 87 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 CD5P06127 495 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 C3AR1Q16581 482 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 TPRX1Q8N7U7 411 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 SLC25A40Q8TBP6 338 aa16.63■□□□□ 0.25
SUDS3-204ENST00000543473 LSM10Q969L4 123 aaKnown RBP16.63■□□□□ 0.25
SUDS3-204ENST00000543473 NYNRINQ9P2P1 1898 aaKnown RBP16.63■□□□□ 0.25
SUDS3-204ENST00000543473 ZNF207O43670 478 aaKnown RBP16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BKO60814 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BJP06899 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BOP23527 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BBP33778 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BDP58876 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BCP62807 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST2H2BEQ16778 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BHQ93079 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BNQ99877 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 HIST1H2BMQ99879 126 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 NDUFAF3Q9BU61 184 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 C21orf140B9A014 251 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 ZNHIT1O43257 154 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 FAM216AQ8WUB2 273 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 AUP1Q9Y679 476 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 TIMD4Q96H15 378 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 DLL3Q9NYJ7 618 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 RAB29O14966 203 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 VENTXO95231 258 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 SSX8Q7RTT4 187 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 STXBP6Q8NFX7 210 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 CLDND2Q8NHS1 167 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 FLYWCH2Q96CP2 140 aaKnown RBP16.62■□□□□ 0.25
SUDS3-204ENST00000543473 OR2J1Q9GZK6 312 aa16.62■□□□□ 0.25
SUDS3-204ENST00000543473 ZG16O60844 167 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 HBZP02008 142 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 LCN2P80188 198 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 C5orf17Q8NAS9 161 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 ZNF785A8K8V0 405 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 S100A4P26447 101 aaKnown RBP16.61■□□□□ 0.25
SUDS3-204ENST00000543473 SRIP30626 198 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 MAGEA5P43359 124 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 RTP5Q14D33 572 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 GFRALQ6UXV0 394 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 C12orf54Q6X4T0 127 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 OR8A1Q8NGG7 326 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 SFRP2Q96HF1 295 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 SDF2L1Q9HCN8 221 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 RHBDL1O75783 438 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 OR2H2O95918 312 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 KLF3P57682 345 aaPredicted RBP16.61■□□□□ 0.25
SUDS3-204ENST00000543473 KIF26BQ2KJY2 2108 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 CBLN1P23435 193 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 PQLC2Q6ZP29 291 aa16.61■□□□□ 0.25
SUDS3-204ENST00000543473 TNFAIP6P98066 277 aaPredicted RBP16.6■□□□□ 0.25
SUDS3-204ENST00000543473 DMRTA1Q5VZB9 504 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 PDCD11Q14690 1871 aaKnown RBP16.6■□□□□ 0.25
SUDS3-204ENST00000543473 Q1RN00 199 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 HEPN1Q6WQI6 88 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 GAGE10A6NGK3 116 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 TGFBR3LH3BV60 316 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 ARL14EPLP0DKL9 152 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 MPZP25189 248 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 MMD2Q8IY49 270 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 ZNF645Q8N7E2 425 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 FOXJ2Q9P0K8 574 aa16.6■□□□□ 0.25
SUDS3-204ENST00000543473 TGIF2LYQ8IUE0 185 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 OR2M7Q8NG81 312 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 LOC390937A0A1W2PQ73 354 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 TMEM210A6NLX4 147 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 A8MWL6 223 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 FBLN5Q9UBX5 448 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 B4E171 279 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 SNRPCP09234 159 aaKnown RBP16.59■□□□□ 0.25
SUDS3-204ENST00000543473 TSPAN7P41732 249 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 FXYD3Q14802 87 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 MDP1Q86V88 176 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 PERPQ96FX8 193 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 PAXXQ9BUH6 204 aa16.59■□□□□ 0.25
SUDS3-204ENST00000543473 FGF5P12034 268 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 UCP1P25874 307 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 ZNF124Q15973 351 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 ATOH7Q8N100 152 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 PAQR4Q8N4S7 273 aaPredicted RBP16.58■□□□□ 0.25
SUDS3-204ENST00000543473 HARBI1Q96MB7 349 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 PATJQ8NI35 1801 aa16.58■□□□□ 0.25
SUDS3-204ENST00000543473 RSPO4Q2I0M5 234 aaPredicted RBP16.58■□□□□ 0.24
SUDS3-204ENST00000543473 CYTL1Q9NRR1 136 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 DCAF10Q5QP82 559 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 OR1L1Q8NH94 360 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 ICAM4Q14773 271 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 TNXAQ16473 311 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 OR51B2Q9Y5P1 312 aa16.58■□□□□ 0.24
SUDS3-204ENST00000543473 A0A1W2PQM1 296 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 CELA2AP08217 269 aa16.57■□□□□ 0.24
SUDS3-204ENST00000543473 RPEQ96AT9 228 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms