RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 IGKV1-33P01594 117 aa14.22□□□□□ -0.13
PDCD2-208ENST00000541970 CNN3Q15417 329 aaKnown RBP14.22□□□□□ -0.13
PDCD2-208ENST00000541970 ANAPC16Q96DE5 110 aa14.22□□□□□ -0.13
PDCD2-208ENST00000541970 DERL1Q9BUN8 251 aa14.22□□□□□ -0.13
PDCD2-208ENST00000541970 SYNGR2O43760 224 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 CCL1P22362 96 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 PSG4Q00888 419 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 FFAR4Q5NUL3 377 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 ZIC4Q8N9L1 334 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 B4GALT7Q9UBV7 327 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 CUL9Q8IWT3 2517 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 C11orf94C9JXX5 98 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 CRYABP02511 175 aaKnown RBP14.21□□□□□ -0.13
PDCD2-208ENST00000541970 SRD5A2P31213 254 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 ARG2P78540 354 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 MSMO1Q15800 293 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 SPATA45Q537H7 98 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 NMSQ5H8A3 153 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 MRPL21Q7Z2W9 205 aaKnown RBP14.21□□□□□ -0.13
PDCD2-208ENST00000541970 ZNF525Q8N782 197 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 OR10G9Q8NGN4 311 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 OR10G7Q8NGN6 311 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 APH1AQ96BI3 265 aa14.21□□□□□ -0.13
PDCD2-208ENST00000541970 KIAA1324LA8MWY0 1029 aaPredicted RBP14.2□□□□□ -0.14
PDCD2-208ENST00000541970 ZNF90Q03938 601 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 SLC38A11Q08AI6 406 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 SIGLECL1Q8N7X8 197 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 WNT10AQ9GZT5 417 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 PKDREJQ9NTG1 2253 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 GTF3C1Q12789 2109 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 SLC22A20A6NK97 555 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 F2Z2F3 143 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 NTN3O00634 580 aaPredicted RBP14.2□□□□□ -0.14
PDCD2-208ENST00000541970 NDUFB4O95168 129 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 ST6GALNAC3Q8NDV1 305 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 MBD3L1Q8WWY6 194 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 STARD4Q96DR4 205 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 NEIL1Q96FI4 390 aaPredicted RBP14.2□□□□□ -0.14
PDCD2-208ENST00000541970 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 DIRC3C9JPN6 131 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 NTF3P20783 257 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 KITLGP21583 273 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 CCL11P51671 97 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 RANP62826 216 aaKnown RBP14.2□□□□□ -0.14
PDCD2-208ENST00000541970 SPINK9Q5DT21 86 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 VHLLQ6RSH7 139 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 Q6ZRM9 215 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 WDYHV1Q96HA8 205 aa14.2□□□□□ -0.14
PDCD2-208ENST00000541970 GPM6AP51674 278 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 Q6ZPA2 131 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 PSMF1Q92530 271 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 COL4A2P08572 1712 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 CLEC18AA5D8T8 446 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 SSPNQ14714 243 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 KIAA1644Q3SXP7 199 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 CLEC18CQ8NCF0 446 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 RAB40CQ96S21 281 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 SIRPB1O00241 398 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 SRP14P37108 136 aaKnown RBP14.19□□□□□ -0.14
PDCD2-208ENST00000541970 RBX1P62877 108 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 VAMP3Q15836 100 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 SLC25A53Q5H9E4 307 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 TPTE2P1Q5T6R2 138 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 HES3Q5TGS1 186 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 FBXW9Q5XUX1 488 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 OR56B2PQ8NGI1 322 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 TAF15Q92804 592 aaKnown RBP eCLIP14.19□□□□□ -0.14
PDCD2-208ENST00000541970 RNF115Q9Y4L5 304 aa14.19□□□□□ -0.14
PDCD2-208ENST00000541970 LOC102723996A0A087X1L8 192 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 C9orf172C9J069 976 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 HS3ST1O14792 307 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 IGHEP01854 428 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 AMTP48728 403 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 SLC35B1P78383 322 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 CNEP1R1Q8N9A8 125 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 PINX1Q96BK5 328 aaKnown RBP14.18□□□□□ -0.14
PDCD2-208ENST00000541970 ALKBH7Q9BT30 221 aaPredicted RBP14.18□□□□□ -0.14
PDCD2-208ENST00000541970 TMEM38BQ9NVV0 291 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 IL36RNQ9UBH0 155 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 MGAQ8IWI9 3026 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 WDR1O75083 606 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 NAPSAO96009 420 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 ACSM6Q6P461 480 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 ZNF611Q8N823 705 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 RDH5Q92781 318 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 SPSB1Q96BD6 273 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 ZNF488Q96MN9 340 aa14.18□□□□□ -0.14
PDCD2-208ENST00000541970 APC2O95996 2303 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 M0QZ24 198 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 FCN1O00602 326 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 SH2D1BO14796 132 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 PLP2Q04941 152 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 SPOCK3Q9BQ16 436 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 C20orf144Q9BQM9 153 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 WDR61Q9GZS3 305 aaKnown RBP14.17□□□□□ -0.14
PDCD2-208ENST00000541970 ZNF586Q9NXT0 402 aa14.17□□□□□ -0.14
PDCD2-208ENST00000541970 WIPI2Q9Y4P8 454 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms