RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 G6PCP35575 357 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 TGFBR3Q03167 851 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 ZNF324BQ6AW86 544 aaPredicted RBP10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 TEX43Q6ZNM6 134 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 EML6Q6ZMW3 1958 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 CXCL13O43927 109 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 CCL3P10147 92 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 NPPCP23582 126 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 HYAL1Q12794 435 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 Q6ZS49 121 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 ZNF114Q8NC26 417 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 OR4B1Q8NGF8 309 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 FRYLO94915 3013 aa10.88□□□□□ -0.67
SFSWAP-209ENST00000540469 C5orf49A4QMS7 147 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 SLC17A3O00476 420 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 DEGS1O15121 323 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 ATP6V1FQ16864 119 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 USF3Q68DE3 2245 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 A8MXE2 369 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 RBX1P62877 108 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 FADS6Q8N9I5 356 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 CPT1CQ8TCG5 803 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 CHCHD2Q9Y6H1 151 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 PIAS2O75928 621 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 NTF3P20783 257 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 CD27P26842 260 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 DSCR4P56555 118 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 FOXL1Q12952 345 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 LEMD1Q68G75 181 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 RARRES3Q9UL19 164 aa10.87□□□□□ -0.67
SFSWAP-209ENST00000540469 IGHV3-64DA0A0J9YX35 117 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 GJE1A6NN92 205 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 RBFOX2O43251 390 aaKnown RBP eCLIP10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 ZG16O60844 167 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 CD99P14209 185 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 RABEPKQ7Z6M1 372 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 NAT8BQ9UHF3 227 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 IGHEP01854 428 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 TMEM11P17152 192 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 HINT1P49773 126 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 PDLIM3Q53GG5 364 aaPredicted RBP10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 SYT13Q7L8C5 426 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 ZDHHC16Q969W1 377 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 DOCK7Q96N67 2140 aa10.86□□□□□ -0.67
SFSWAP-209ENST00000540469 RNF212BA8MTL3 300 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 RAC2P15153 192 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 DAZAP2Q15038 168 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 RNPS1Q15287 305 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 OR5A2Q8NGI9 324 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 OR1L1Q8NH94 360 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 APOBEC3DQ96AK3 386 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 APH1AQ96BI3 265 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 UQCR10Q9UDW1 63 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 WDFY3Q8IZQ1 3526 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 F2Z2F3 143 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 M0QZ24 198 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 RAC1P63000 192 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 ARF1P84077 181 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 RPL19P84098 196 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 TMEM144Q7Z5S9 345 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM58AQ8N1B3 248 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 PCED1AQ9H1Q7 454 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 CFAP54Q96N23 3096 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 LIFP15018 202 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 RAB30Q15771 203 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 HLA-DRB5Q30154 266 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 ATOH7Q8N100 152 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 OR5P3Q8WZ94 311 aa10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 TBL2Q9Y4P3 447 aaKnown RBP10.85□□□□□ -0.67
SFSWAP-209ENST00000540469 MLNRO43193 412 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 GLB1P16278 677 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 SLC35B1P78383 322 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 SRSF7Q16629 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 CLEC2AQ6UVW9 174 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 DRAM1Q8N682 238 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 STPG4Q8N801 248 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 CADM4Q8NFZ8 388 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 RNF2Q99496 336 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 WNT10AQ9GZT5 417 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 KCNIP2Q9NS61 270 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 DLL3Q9NYJ7 618 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 LAMTOR2Q9Y2Q5 125 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 SCO2A0A1W2PP80 73 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 ANKRD30BLA7E2S9 258 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 CCL25O15444 150 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 CEACAM21Q3KPI0 293 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 H2BFWTQ7Z2G1 175 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 QTRT1Q9BXR0 403 aaKnown RBP10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 FBXL7Q9UJT9 491 aa10.84□□□□□ -0.67
SFSWAP-209ENST00000540469 FAM90A26D6RGX4 464 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 463.5 ms