RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TNFSF18Q9UNG2 199 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 U3KQK5 164 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 AMBPP02760 352 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 FAM106CPP0CH98 169 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 VSIG8P0DPA2 414 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 SRMP19623 302 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 TIMM50Q3ZCQ8 353 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 KLF17Q5JT82 389 aaPredicted RBP6.25□□□□□ -1.41
GNE-205ENST00000539815 TMEM219Q86XT9 240 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 GGHQ92820 318 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 TBX5Q99593 518 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 NRIP2Q9BQI9 281 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 RAB9BQ9NP90 201 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 SS18L2Q9UHA2 77 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 FOXJ3Q9UPW0 622 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 SORL1Q92673 2214 aa6.25□□□□□ -1.41
GNE-205ENST00000539815 IGKV1D-42A0A075B6H8 117 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 PSMB11A5LHX3 300 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ZNF850A8MQ14 1090 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 IQCF6A8MYZ5 107 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ZNF593O00488 134 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 SFTA3P0C7M3 94 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ST3GAL4Q11206 333 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 MEP1BQ16820 701 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 WDR38Q5JTN6 314 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 COL5A1-AS1Q5SY13 56 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 LINC00471Q8N535 108 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 SLC25A46Q96AG3 418 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 SMIM8Q96KF7 97 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 GPN1Q9HCN4 374 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 SIRT4Q9Y6E7 314 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 TRGV10A0A0A0MS01 117 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 RLN1P04808 185 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 NHLRC4P0CG21 123 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 RAP2AP10114 183 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 CPEP16870 476 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ZNF20P17024 532 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 IER3P46695 156 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 CX3CR1P49238 355 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 PAX5Q02548 391 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 MSMPQ1L6U9 139 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 LIAT1Q6ZQX7 453 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 SLC35G3Q8N808 338 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 NMNAT3Q96T66 252 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 MRPL15Q9P015 296 aaKnown RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 AMMECR1Q9Y4X0 333 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 ZANQ9Y493 2812 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 C7orf77A4D0Y5 90 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ZNF732B4DXR9 585 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 H0YL77 283 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 M0R129 80 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 M0R1W7 72 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 MAS1LP35410 378 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 LYPD4Q6UWN0 246 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ZNF627Q7L945 461 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 ERASQ7Z444 233 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 KLHL30-AS1Q8NEE0 82 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 OR10X1Q8NGY0 326 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 IL17DQ8TAD2 202 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 MALSU1Q96EH3 234 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 SFRP2Q96HF1 295 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
GNE-205ENST00000539815 RGCCQ9H4X1 137 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 PSORS1C1Q9UIG5 152 aa6.24□□□□□ -1.41
GNE-205ENST00000539815 FAM230AA0A1W2PPH8 454 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 ZNF670-ZNF695F2Z2N8 137 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 CST4P01036 141 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 SCG5P05408 212 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 UCHL1P09936 223 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 SDC2P34741 201 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 LTC4SQ16873 150 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 PAGE3Q5JUK9 113 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 C22orf42Q6IC83 251 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 MBOAT2Q6ZWT7 520 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 LYG2Q86SG7 212 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 ZNF584Q8IVC4 421 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 SLAMF6Q96DU3 332 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 OR52A1Q9UKL2 312 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 TNFRSF18Q9Y5U5 241 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 TMEM14AQ9Y6G1 99 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 RAMP3O60896 148 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 FABP3P05413 133 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 ASAH2BP0C7U1 165 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 OR5H8P0DN80 308 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 VDAC1P21796 283 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 OR3A4PP47883 348 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 SRSF7Q16629 238 aaKnown RBP eCLIP6.23□□□□□ -1.41
GNE-205ENST00000539815 IDNKQ5T6J7 187 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 HACD2Q6Y1H2 254 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 MOB3BQ86TA1 216 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 RTN4RL2Q86UN3 420 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 TSSK2Q96PF2 358 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 OR52D1Q9H346 318 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 B9D1Q9UPM9 204 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 PSMA6P60900 246 aaKnown RBP6.23□□□□□ -1.41
GNE-205ENST00000539815 RPS27AP62979 156 aaKnown RBP6.23□□□□□ -1.41
GNE-205ENST00000539815 HAGHQ16775 308 aa6.23□□□□□ -1.41
GNE-205ENST00000539815 SLC16A9Q7RTY1 509 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms