RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 REC114Q7Z4M0 266 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 TGIF2LYQ8IUE0 185 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 TRAPPC2LQ9UL33 140 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 PKDREJQ9NTG1 2253 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 ANKHD1Q8IWZ3 2542 aaKnown RBP14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNF727A8MUV8 499 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 H3BQ15 152 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 SIAH2O43255 324 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 LHBP01229 141 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 NDUFB7P17568 137 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 GAPTQ8N292 157 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 PLEKHF2Q9H8W4 249 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 WIPI2Q9Y4P8 454 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 BTBD17A6NE02 478 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 SEC14L6B5MCN3 397 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 SLC31A2O15432 143 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 TK1P04183 234 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 CD3EP07766 207 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 GNLYP22749 145 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 TNFSF4P23510 183 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 PRDX2P32119 198 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 RND3P61587 244 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 AESQ08117 197 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 GAMTQ14353 236 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 PDZD11Q5EBL8 140 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 UBALD1Q8TB05 177 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 RAB39BQ96DA2 213 aa14.25□□□□□ -0.13
PCDHB17P-201ENST00000539533 USP24Q9UPU5 2620 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 IGKV1D-17A0A075B6S4 117 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 C17orf100A8MU93 164 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 SSSCA1O60232 199 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 HLA-DRB3P79483 266 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TLE1Q04724 770 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TFF3Q07654 80 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 FAM185AQ8N0U4 392 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 PRR18Q8N4B5 295 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TMEM252Q8N6L7 170 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 LYRM2Q9NU23 88 aaPredicted RBP14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 KIAA1456Q9P272 454 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 UBE2J1Q9Y385 318 aaPredicted RBP14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 KIAA2026Q5HYC2 2103 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 IFNL4K9M1U5 179 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 HSD17B6O14756 317 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 SRP19P09132 144 aaKnown RBP14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 GNRHRP30968 328 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 OR3A1P47881 315 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TAS2R60P59551 318 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 HAGHQ16775 308 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNF343Q6P1L6 599 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNF695Q8IW36 515 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 IL1F10Q8WWZ1 152 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 COQ2Q96H96 371 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TMEM56Q96MV1 263 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 SPIN2AQ99865 258 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 SPIN2BQ9BPZ2 258 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 GPR61Q9BZJ8 451 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 SLC25A31Q9H0C2 315 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 MAGT1Q9H0U3 335 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 PRO1933Q9H354 126 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 TMEM56-RWDD3S4R434 201 aa14.24□□□□□ -0.13
PCDHB17P-201ENST00000539533 VSTM5A8MXK1 200 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HSPA12AO43301 675 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 CXCL1P09341 107 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 DDTP30046 118 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 TAGLN2P37802 199 aaKnown RBP14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 GABRA2P47869 451 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 CEBPGP53567 150 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 GFI1BQ5VTD9 330 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 TBC1D26Q86UD7 250 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 TPRX1Q8N7U7 411 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 OR5C1Q8NGR4 320 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 Q8WTZ3 238 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 DCAF16Q9NXF7 216 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 RNF7Q9UBF6 113 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BKO60814 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BJP06899 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BOP23527 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BBP33778 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BDP58876 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 UBE2KP61086 200 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BCP62807 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 VAMP2P63027 116 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST2H2BEQ16778 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 CXorf66Q5JRM2 361 aaPredicted RBP14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 RNASE11Q8TAA1 199 aaKnown RBP14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BHQ93079 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BNQ99877 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H2BMQ99879 126 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 PPP1R3CQ9UQK1 317 aa14.23□□□□□ -0.13
PCDHB17P-201ENST00000539533 A0A087WWC5 75 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 PPP1R2P9O14990 202 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 ADAM20O43506 726 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 SOD3P08294 240 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 CTXN2P0C2S0 81 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 SELENOHQ8IZQ5 122 aaKnown RBP14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 URGCP-MRPS24S4R325 110 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms