RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 REG1BP48304 166 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 KISS1Q15726 138 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 PAN3Q58A45 887 aaKnown RBP9.6□□□□□ -0.87
CAPN1-223ENST00000533079 RSBN1Q5VWQ0 802 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-223ENST00000533079 FAM89BQ8N5H3 189 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 MRGPRDQ8TDS7 321 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
CAPN1-223ENST00000533079 COPZ2Q9P299 210 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 MTFP1Q9UDX5 166 aa9.6□□□□□ -0.87
CAPN1-223ENST00000533079 FAM90A10PA6NDY2 464 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 RAB27BO00194 218 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 HSPB6O14558 160 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 LANCL1O43813 399 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ORC5O43913 435 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 PFDN1O60925 122 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 PRSS3P35030 304 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 RAB9AP51151 201 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ZNF137PP52743 207 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 KLF9Q13886 244 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-223ENST00000533079 IL13RA2Q14627 380 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 LTC4SQ16873 150 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ZNF57Q68EA5 555 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-223ENST00000533079 Q8N1Y9 231 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 TOMM5Q8N4H5 51 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 OR5D18Q8NGL1 313 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ARPC1AQ92747 370 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 FAM46BQ96A09 425 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 OR4C12Q96R67 309 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ATG5Q9H1Y0 275 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 KLK15Q9H2R5 256 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 AUNIPQ9H7T9 357 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
CAPN1-223ENST00000533079 PLECQ15149 4684 aaKnown RBP9.59□□□□□ -0.87
CAPN1-223ENST00000533079 TRAV24A0A0B4J272 114 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 FAM240BA0A1B0GVZ2 78 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ANKRD20A5PA0PJZ0 165 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
CAPN1-223ENST00000533079 RBBP9O75884 186 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 HLA-DRB1P01911 266 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 LGALS1P09382 135 aaKnown RBP9.58□□□□□ -0.88
CAPN1-223ENST00000533079 CD3GP09693 182 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 GZMHP20718 246 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 SLURP1P55000 103 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 PLA2G7Q13093 441 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 GPR176Q14439 515 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ARL6IP1Q15041 203 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 AWAT2Q6E213 333 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ELP2Q6IA86 826 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 TCTEX1D1Q8N7M0 179 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 PXT1Q8NFP0 134 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 OR52I2Q8NH67 350 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 RFESDQ8TAC1 157 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ENKURQ8TC29 256 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 GPX8Q8TED1 209 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 MRPS24Q96EL2 167 aaKnown RBP9.58□□□□□ -0.88
CAPN1-223ENST00000533079 OR5B12Q96R08 314 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 MARVELD1Q9BSK0 173 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 TOLLIPQ9H0E2 274 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 CST11Q9H112 138 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 IL36GQ9NZH8 169 aa9.58□□□□□ -0.88
CAPN1-223ENST00000533079 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 TRAV18A0A075B6X5 111 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 A0A1W2PPE3 182 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 ATP6V0E1O15342 81 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 CA11O75493 328 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 IGLV1-51P01701 117 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 F2RL1P55085 397 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 UNC119Q13432 240 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 MMDQ15546 238 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 PLET1Q6UQ28 207 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 CADM3Q8N126 398 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 GPER1Q99527 375 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 URM1Q9BTM9 101 aaKnown RBP9.57□□□□□ -0.88
CAPN1-223ENST00000533079 TM2D1Q9BX74 207 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 LPAR5Q9H1C0 372 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 TPSG1Q9NRR2 321 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 HERC2O95714 4834 aa9.57□□□□□ -0.88
CAPN1-223ENST00000533079 SDCBPO00560 298 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-223ENST00000533079 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
CAPN1-223ENST00000533079 TMEM225BP0DP42 221 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 RPS27AP62979 156 aaKnown RBP9.56□□□□□ -0.88
CAPN1-223ENST00000533079 HAGHQ16775 308 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 OR56B1Q8NGI3 324 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 OR10R2Q8NGX6 335 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 PLPPR1Q8TBJ4 325 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 FLYWCH2Q96CP2 140 aaKnown RBP9.56□□□□□ -0.88
CAPN1-223ENST00000533079 NEDD4LQ96PU5 975 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 SPACA5Q96QH8 159 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 IFT22Q9H7X7 185 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 RAB9BQ9NP90 201 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 PARP11Q9NR21 331 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 GFOD1Q9NXC2 390 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 SORL1Q92673 2214 aa9.56□□□□□ -0.88
CAPN1-223ENST00000533079 hCG_2014768A0A024R1R8 64 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
CAPN1-223ENST00000533079 A0A087WW49 117 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms