RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 CDX1P47902 265 aaPredicted RBP13.28□□□□□ -0.28
CCS-203ENST00000526058 SCAND1P57086 179 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 GNG2P59768 71 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 LSM3P62310 102 aaKnown RBP13.28□□□□□ -0.28
CCS-203ENST00000526058 CX3CL1P78423 397 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 RCC1LQ96I51 464 aaKnown RBP13.28□□□□□ -0.28
CCS-203ENST00000526058 P2RX4Q99571 388 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 DCSTAMPQ9H295 470 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 METTL1Q9UBP6 276 aaKnown RBP13.28□□□□□ -0.28
CCS-203ENST00000526058 RBM7Q9Y580 266 aaKnown RBP13.28□□□□□ -0.28
CCS-203ENST00000526058 ETV7Q9Y603 341 aa13.28□□□□□ -0.28
CCS-203ENST00000526058 TRAV18A0A075B6X5 111 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 APOA2P02652 100 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 EGR2P11161 476 aaPredicted RBP13.27□□□□□ -0.29
CCS-203ENST00000526058 PITPNAQ00169 270 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 TIMM50Q3ZCQ8 353 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 ZNF660Q6AZW8 331 aaPredicted RBP13.27□□□□□ -0.29
CCS-203ENST00000526058 PDPNQ86YL7 162 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 FLYWCH2Q96CP2 140 aaKnown RBP13.27□□□□□ -0.29
CCS-203ENST00000526058 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 TPSG1Q9NRR2 321 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 NECAP2Q9NVZ3 263 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 A3GALT2U3KPV4 340 aa13.27□□□□□ -0.29
CCS-203ENST00000526058 CCL24O00175 119 aa13.26□□□□□ -0.29
CCS-203ENST00000526058 NFYAP23511 347 aaPredicted RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 RPS19P39019 145 aaKnown RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 KIAA0141Q14154 515 aaPredicted RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
CCS-203ENST00000526058 MINDY2Q8NBR6 621 aa13.26□□□□□ -0.29
CCS-203ENST00000526058 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
CCS-203ENST00000526058 TSNAXQ99598 290 aaKnown RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 FAM103A1Q9BTL3 118 aaKnown RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 AURKAIP1Q9NWT8 199 aaPredicted RBP13.26□□□□□ -0.29
CCS-203ENST00000526058 TRIM64CA6NLI5 447 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 SLC25A17O43808 307 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 SOX15O60248 233 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 CA2P00918 260 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 IGLV2-23P01705 113 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 CRIP2P52943 208 aaPredicted RBP13.25□□□□□ -0.29
CCS-203ENST00000526058 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 TMEM65Q6PI78 240 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 BVESQ8NE79 360 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 ABHD5Q8WTS1 349 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 GNB4Q9HAV0 340 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 SPATA2Q9UM82 520 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 NUBP2Q9Y5Y2 271 aa13.25□□□□□ -0.29
CCS-203ENST00000526058 A0A1W2PN81 502 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 LINC00473A8K010 186 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 SPDEFO95238 335 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 DUS4LO95620 317 aaKnown RBP13.24□□□□□ -0.29
CCS-203ENST00000526058 CTXN2P0C2S0 81 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 PTHLHP12272 177 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 HOXD3P31249 432 aaPredicted RBP13.24□□□□□ -0.29
CCS-203ENST00000526058 DUTP33316 252 aaKnown RBP13.24□□□□□ -0.29
CCS-203ENST00000526058 CHRNA7P36544 502 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 RAB9AP51151 201 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 RAB25P57735 213 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 KRTAP10-11P60412 298 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 ZNF562Q6V9R5 426 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 REC114Q7Z4M0 266 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 GVQW1Q8N7I0 195 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 ZNF491Q8N8L2 437 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 CASTOR1Q8WTX7 329 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 C4orf3Q8WVX3 66 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 AUNIPQ9H7T9 357 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 OR2W1Q9Y3N9 320 aa13.24□□□□□ -0.29
CCS-203ENST00000526058 TNCP24821 2201 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 IGKV1D-13A0A0B4J2D9 117 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 SRRM4A7MD48 611 aaKnown RBP13.23□□□□□ -0.29
CCS-203ENST00000526058 TMEM127O75204 238 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 CRYGBP07316 175 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 IGKV1-13P0DP09 117 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 LUMP51884 338 aaPredicted RBP13.23□□□□□ -0.29
CCS-203ENST00000526058 SSBP2P81877 361 aaPredicted RBP13.23□□□□□ -0.29
CCS-203ENST00000526058 PJVKQ0ZLH3 352 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 TMEM177Q53S58 311 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 PPP1R27Q86WC6 154 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 CROCCP3Q8IVE0 287 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 LFNGQ8NES3 379 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 DDB2Q92466 427 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 UBE2E2Q96LR5 201 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 OR5B12Q96R08 314 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 DIABLOQ9NR28 239 aa13.23□□□□□ -0.29
CCS-203ENST00000526058 A0A0A6YYH2 397 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 A6NJ64 397 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 ARPC1BO15143 372 aaKnown RBP13.22□□□□□ -0.29
CCS-203ENST00000526058 IGLV2-14P01704 120 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 FCER2P06734 321 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 LGALS7P47929 136 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
CCS-203ENST00000526058 TMEM267Q0VDI3 215 aaPredicted RBP13.22□□□□□ -0.29
CCS-203ENST00000526058 RTL8BQ17RB0 113 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 UNQ5815/PRO19632Q6UWF5 114 aa13.22□□□□□ -0.29
CCS-203ENST00000526058 ZNF645Q8N7E2 425 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms