RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 Q6ZS49 121 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 SYT13Q7L8C5 426 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 SPATA12Q7Z6I5 190 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF547Q8IVP9 402 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 LHX4Q969G2 390 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PTPN18Q99952 460 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 FAM103A1Q9BTL3 118 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 RTN4RQ9BZR6 473 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 S1PR5Q9H228 398 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 SCRT2Q9NQ03 307 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 IL36BQ9NZH7 164 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 THYN1Q9P016 225 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 JKAMPQ9P055 326 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 MCTS1Q9ULC4 181 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 BOKQ9UMX3 212 aaPredicted RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PSG8Q9UQ74 426 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 COL4A6Q14031 1691 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 TRBV20OR9-2A0A075B6H5 130 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 TRAV38-1A0A0B4J264 116 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 CTXND1A0A1B0GTU2 59 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PRSS37A4D1T9 235 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF840PA6NDX5 716 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 H7C1C5 153 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ERI3O43414 337 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 TBL1XO60907 577 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 HBZP02008 142 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PNMTP11086 282 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 NPY1RP25929 384 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PTGDSP41222 190 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 CA7P43166 264 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 CLDN17P56750 224 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 POLR2LP62875 67 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 HERV-K104P63124 156 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 NTHL1P78549 312 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 EGR4Q05215 589 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 PRDX1Q06830 199 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 MGAT2Q10469 447 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 LTC4SQ16873 150 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 DUSP28Q4G0W2 176 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ABCA11PQ4W5N1 156 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 TSPO2Q5TGU0 170 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 RNF144BQ7Z419 303 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 MARCH3Q86UD3 253 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ATOH7Q8N100 152 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF114Q8NC26 417 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF439Q8NDP4 499 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 OR2K2Q8NGT1 345 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 OR4F5Q8NH21 305 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 OR2AE1Q8NHA4 323 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF418Q8TF45 676 aaPredicted RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 LSM10Q969L4 123 aaKnown RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 BORCS7Q96B45 105 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF501Q96CX3 271 aaPredicted RBP2.76□□□□□ -1.97
KCTD3-205ENST00000495537 RAX2Q96IS3 184 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 GPR82Q96P67 336 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 RAB40CQ96S21 281 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 NECAP2Q9NVZ3 263 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 HIF1ANQ9NWT6 349 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 LY96Q9Y6Y9 160 aa2.76□□□□□ -1.97
KCTD3-205ENST00000495537 SPAG17Q6Q759 2223 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 TNRC6AQ8NDV7 1962 aaKnown RBP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 LOC101059948A0A1B0GTJ6 334 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 A0A1W2PP11 408 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 SLC22A20A6NK97 555 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 GRXCR1A8MXD5 290 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 VWC2LB2RUY7 222 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 TLX3O43711 291 aaPredicted RBP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 CHST1O43916 411 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 NUDT14O95848 222 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 IGHMP01871 453 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 PSG2P11465 335 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 CPMP14384 443 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 CCL1P22362 96 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 SSTR5P35346 364 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 P2RY2P41231 377 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 OR3A4PP47883 348 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 UBE2G1P62253 170 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 GNB1P62873 340 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 PMP22Q01453 160 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 DPTQ07507 201 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 PLCXD2Q0VAA5 305 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 RAB30Q15771 203 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 C22orf39Q6P5X5 142 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 ZNF788Q6ZQV5 615 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 TMEM136Q6ZRR5 245 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 C2orf91Q6ZV80 131 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 CPEB2Q7Z5Q1 589 aaKnown RBP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.75□□□□□ -1.97
KCTD3-205ENST00000495537 FAM58AQ8N1B3 248 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 SYT8Q8NBV8 401 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 OR2A1Q8NGT9 310 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 VSTM2AQ8TAG5 236 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 SCGB1C1Q8TD33 95 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 BLNKQ8WV28 456 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 RNF133Q8WVZ7 376 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 FGF14Q92915 247 aa2.75□□□□□ -1.97
KCTD3-205ENST00000495537 GALMQ96C23 342 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms