RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 VWC2Q2TAL6 325 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 FAM209BQ5JX69 171 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 CDPF1Q6NVV7 123 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 DEFB123Q8N688 67 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 WDR31Q8NA23 367 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 OR10G9Q8NGN4 311 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 OR10G7Q8NGN6 311 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TRIB1Q96RU8 372 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 DMRT1Q9Y5R6 373 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 OR5H1A6NKK0 313 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 WISP2O76076 250 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 KBTBD11O94819 623 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 RPS16P62249 146 aaKnown RBP13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TLE1Q04724 770 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 ADIRFQ15847 76 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TMEM241Q24JQ0 296 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TCTEX1D1Q8N7M0 179 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 TPRX1Q8N7U7 411 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 OR10P1Q8NGE3 313 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 OR13A1Q8NGR1 328 aa13.47□□□□□ -0.25
SEMA4D-220ENST00000492386 IGHG3P01860 377 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 SOX8P57073 446 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 COL10A1Q03692 680 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 FFAR4Q5NUL3 377 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 NCR3LG1Q68D85 454 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 OR10D4PQ8NGN7 298 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 LOXL4Q96JB6 756 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 UFSP2Q9NUQ7 469 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 TRBV23-1A0A0A0MS06 115 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 ZNF891A8MT65 544 aaPredicted RBP13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 MBP02144 154 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 MDKP21741 143 aaPredicted RBP13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 PSMB3P49720 205 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 C4orf17Q53FE4 359 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 PDZD11Q5EBL8 140 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 H2BFWTQ7Z2G1 175 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 GATAD1Q8WUU5 269 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 LURAP1Q96LR2 239 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 NPCDR1Q9BY65 106 aa13.46□□□□□ -0.25
SEMA4D-220ENST00000492386 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 COX5AP20674 150 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 SPINK9Q5DT21 86 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 ZNF66Q6ZN08 573 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 C16orf82Q7Z2V1 217 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 CNEP1R1Q8N9A8 125 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 RPUSD4Q96CM3 377 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 CIB3Q96Q77 187 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 TAAR6Q96RI8 345 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 FZR1Q9UM11 496 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 PFN1P07737 140 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 KITLGP21583 273 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 KIR2DL2P43627 348 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 RPL23P62829 140 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 Q3ZCU0 254 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 VWA1Q6PCB0 445 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 ACTR3CQ9C0K3 210 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 MSL2Q9HCI7 577 aa13.45□□□□□ -0.26
SEMA4D-220ENST00000492386 DEFB108AA8MXU0 73 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 C15orf65H3BRN8 121 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 TIMM8AO60220 97 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 BSXQ3C1V8 233 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 LURAP1LQ8IV03 231 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 HSD17B10Q99714 261 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 DCTN5Q9BTE1 182 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 PARLQ9H300 379 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 MANBALQ9NQG1 85 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 PSG11Q9UQ72 335 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 LAMP3Q9UQV4 416 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 CECR9P0C854 216 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 FABP6P51161 128 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 GNB2P62879 340 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 SMIM21Q3B7S5 101 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 ZNF383Q8NA42 475 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 OR10A7Q8NGE5 316 aa13.44□□□□□ -0.26
SEMA4D-220ENST00000492386 RD3LP0DJH9 198 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 HOXC12P31275 282 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 FOXF2Q12947 444 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 CD177Q8N6Q3 437 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 Q8N7P7 452 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 OR4F4Q96R69 305 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 PCNX2A6NKB5 2137 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 CACNA1GO43497 2377 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 C15orf62A8K5M9 175 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 NDUFS6O75380 124 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 RBMXL2O75526 392 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 DEFA4P12838 97 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 C9orf106Q8NAJ2 232 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 OR4X1Q8NH49 305 aa13.43□□□□□ -0.26
SEMA4D-220ENST00000492386 SNX22Q96L94 193 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms