RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TMEM106BQ9NUM4 274 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 CALYQ9NYX4 217 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 FZR1Q9UM11 496 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 STRAPQ9Y3F4 350 aaKnown RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LSM5Q9Y4Y9 91 aaKnown RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 INTS1Q8N201 2190 aaKnown RBP5.3□□□□□ -1.56
SF3A3-208ENST00000489537 CENPEQ02224 2701 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 LRBAP50851 2863 aa5.3□□□□□ -1.56
SF3A3-208ENST00000489537 IGKV1D-13A0A0B4J2D9 117 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 BTBD17A6NE02 478 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 SHISA9B4DS77 424 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 TMEM178BH3BS89 294 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 WNT9BO14905 357 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 ZNHIT1O43257 154 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 ADAM20O43506 726 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 SYNGR2O43760 224 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 HRASP01112 189 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 IFNA5P01569 189 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 RNASE1P07998 156 aaKnown RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 FGF2P09038 288 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 IGKV1-13P0DP09 117 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 HKR1P10072 659 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 GLIPR1P48060 266 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 THBS3P49746 956 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 MORN2Q502X0 79 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 Q6ZPA2 131 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 MRPL41Q8IXM3 137 aaKnown RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 BATF2Q8N1L9 274 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 MUC15Q8N387 334 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 STPG2Q8N412 459 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 DRAM1Q8N682 238 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 BOLLQ8N9W6 283 aaKnown RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 OR13A1Q8NGR1 328 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 OR4S2Q8NH73 311 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 OR1L1Q8NH94 360 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 TCTEX1D2Q8WW35 142 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 RAB1CQ92928 201 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 TNFRSF14Q92956 283 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 SMIM8Q96KF7 97 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 TSNAXQ99598 290 aaKnown RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 PARD6GQ9BYG4 376 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 SMDT1Q9H4I9 107 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 GFOD1Q9NXC2 390 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 FKBP11Q9NYL4 201 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 IDI2-AS1Q9NZ38 188 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 CISD1Q9NZ45 108 aaKnown RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF581Q9P0T4 197 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 SLC25A10Q9UBX3 287 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-208ENST00000489537 ZGRF1Q86YA3 2104 aa5.29□□□□□ -1.56
SF3A3-208ENST00000489537 DIDO1Q9BTC0 2240 aaKnown RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 IGHV1-69-2A0A0G2JMI3 117 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 NKX2-6A6NCS4 301 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 C15orf65H3BRN8 121 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 PITX3O75364 302 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 NMBP08949 121 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 OR8U8P0C7N1 319 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 CGB3P0DN86 165 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 CGB7P0DN87 165 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 NQO2P16083 231 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF16P17020 682 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 LPAR6P43657 344 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 SULT1A1P50225 295 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 CAV2P51636 162 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 F2RL1P55085 397 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 TMEM33P57088 247 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 RPL31P62899 125 aaKnown RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 CCL8P80075 99 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 EDDM3AQ14507 147 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 RTL8BQ17RB0 113 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF672Q499Z4 452 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 ALKAL2Q6UX46 152 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 HEPN1Q6WQI6 88 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 H2BFWTQ7Z2G1 175 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 COMMD7Q86VX2 200 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 WFDC3Q8IUB2 231 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 FOXRED2Q8IWF2 684 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 SLC7A5P1Q8MH63 180 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 SPAG16Q8N0X2 631 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 PUSL1Q8N0Z8 303 aaKnown RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 LINC00311Q8N616 119 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 OR1S2Q8NGQ3 325 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 OR52E5Q8NH55 327 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 VSTM2AQ8TAG5 236 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 PINX1Q96BK5 328 aaKnown RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 ZNF714Q96N38 554 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 GAFA1Q96PS6 74 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 AGMATQ9BSE5 352 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 TMEM204Q9BSN7 226 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 ABHD14AQ9BUJ0 271 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 CBLN4Q9NTU7 201 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 OR5AC2Q9NZP5 309 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 OR1A1Q9P1Q5 309 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 MIOXQ9UGB7 285 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 RPUSD1Q9UJJ7 312 aaKnown RBP5.28□□□□□ -1.56
SF3A3-208ENST00000489537 PSG11Q9UQ72 335 aa5.28□□□□□ -1.56
SF3A3-208ENST00000489537 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
SF3A3-208ENST00000489537 ANKRD34BA5PLL1 514 aa5.27□□□□□ -1.57
SF3A3-208ENST00000489537 FAM90A27PA6NNH2 459 aa5.27□□□□□ -1.57
SF3A3-208ENST00000489537 LEUTXA8MZ59 168 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms