RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 NPYP01303 97 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 NUP62P37198 522 aaPredicted RBP0.29□□□□□ -2.36
SMC4-219ENST00000487747 IFNGR2P38484 337 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 AKR1C3P42330 323 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 PSMD7P51665 324 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 CTBP2P56545 445 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 RAB8AP61006 207 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 DAD1P61803 113 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 HERVK_113P63121 156 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 PLCXD2Q0VAA5 305 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 C1DQ13901 141 aaKnown RBP0.29□□□□□ -2.36
SMC4-219ENST00000487747 TMEM155Q4W5P6 130 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 RBM48Q5RL73 367 aaKnown RBP0.29□□□□□ -2.36
SMC4-219ENST00000487747 SPATA31B1PQ5VZV4 182 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 SCGB1D4Q6XE38 83 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 DYNC2LI1Q8TCX1 351 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 RPS4Y2Q8TD47 263 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 RNASE6Q93091 150 aaKnown RBP0.29□□□□□ -2.36
SMC4-219ENST00000487747 PPWD1Q96BP3 646 aaKnown RBP0.29□□□□□ -2.36
SMC4-219ENST00000487747 NRBP2Q9NSY0 501 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 STK38LQ9Y2H1 464 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 THSD7AQ9UPZ6 1657 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 POLEQ07864 2286 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 GRIN2BQ13224 1484 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 BRWD1Q9NSI6 2320 aa0.29□□□□□ -2.36
SMC4-219ENST00000487747 A0A087WUU8 490 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 GOLGA8QA0A0J9YX86 632 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 GOLGA8RI6L899 631 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 LIN7AO14910 233 aaPredicted RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 GSTZ1O43708 216 aaPredicted RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 MPZL2O60487 215 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 ARL6IP5O75915 188 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 ASS1P00966 412 aaKnown RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 BPGMP07738 259 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 CRATP43155 626 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 DLX6P56179 175 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 TMEM258P61165 79 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 TMEM267Q0VDI3 215 aaPredicted RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 STX3Q13277 289 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 USF2Q15853 346 aaPredicted RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 Q1T7F1 81 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 LRRC26Q2I0M4 334 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 LCN8Q6JVE9 175 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 FP248Q71RG6 208 aaPredicted RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 COPS6Q7L5N1 327 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 DAND5Q8N907 189 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 OR1L8Q8NGR8 309 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 SLC7A6Q92536 515 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 CCDC124Q96CT7 223 aaKnown RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 EIF5A2Q9GZV4 153 aaKnown RBP0.28□□□□□ -2.36
SMC4-219ENST00000487747 TMEM222Q9H0R3 208 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 SIPA1L1O43166 1804 aa0.28□□□□□ -2.36
SMC4-219ENST00000487747 SMARCA4P51532 1647 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 CUL9Q8IWT3 2517 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 TRAPPC13A5PLN9 417 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 UBE2L6O14933 153 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 HBZP02008 142 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 SERPINA7P05543 415 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 CCDC172P0C7W6 258 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 IL9P15248 144 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 GABRA2P47869 451 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 CLEC12BQ2HXU8 276 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 FBXO48Q5FWF7 155 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 TMEM31Q5JXX7 168 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 LYZL1Q6UWQ5 148 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 SLC13A5Q86YT5 568 aaPredicted RBP0.27□□□□□ -2.37
SMC4-219ENST00000487747 C1orf174Q8IYL3 243 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 Q8N2B8 174 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 NATD1Q8N6N6 113 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 C9orf163Q8N9P6 203 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 OR52E4Q8NGH9 312 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 OR51T1Q8NGJ9 327 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 RNASEH2CQ8TDP1 164 aaKnown RBP0.27□□□□□ -2.37
SMC4-219ENST00000487747 SMIM12Q96EX1 92 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 SFRP2Q96HF1 295 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 DOHHQ9BU89 302 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 ARFGEF3Q5TH69 2177 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 ABCC12Q96J65 1359 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 CACNA1BQ00975 2339 aa0.27□□□□□ -2.37
SMC4-219ENST00000487747 USP24Q9UPU5 2620 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 IGHV1-18A0A0C4DH31 117 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 SULT1C2O00338 296 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 COPEO14579 308 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 MRASO14807 208 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 TNFAIP8O95379 198 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 APOA1P02647 267 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 ATP5G1P05496 136 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 ADORA1P30542 326 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 CCR7P32248 378 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 CCR2P41597 374 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 EVX1P49640 407 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 H2BFSP57053 126 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 BTN3A2P78410 334 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 MOGQ16653 247 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 MIAQ16674 131 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 SLC36A2Q495M3 483 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 KTN1-AS1Q86SY8 53 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 LRRC34Q8IZ02 419 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 C15orf53Q8NAA6 179 aa0.26□□□□□ -2.37
SMC4-219ENST00000487747 STOML3Q8TAV4 291 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms