RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HCFC1P51610 2035 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 CLDN14O95500 239 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 IFNA5P01569 189 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 GPR12P47775 334 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 PEA15Q15121 130 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 DHRS7BQ6IAN0 325 aaPredicted RBP10.79□□□□□ -0.68
SEC13-216ENST00000479868 SLC25A24Q6NUK1 477 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 DEFB108BQ8NET1 73 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 C14orf79Q96F83 325 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 RSG1Q9BU20 258 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 JKAMPQ9P055 326 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 F2RL2O00254 374 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 YPEL1O60688 119 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 DUTP33316 252 aaKnown RBP10.79□□□□□ -0.68
SEC13-216ENST00000479868 BSPH1Q075Z2 132 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 AKR1C8PQ5T2L2 129 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 STUMQ69YW2 141 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 ZNF561Q8N587 486 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 TCTEX1D1Q8N7M0 179 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 YPEL2Q96QA6 119 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 RARRES2Q99969 163 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 CALYQ9NYX4 217 aa10.79□□□□□ -0.68
SEC13-216ENST00000479868 MARCH11A6NNE9 402 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 H2AFB1P0C5Y9 115 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 FAM87AP0C7U9 286 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 CGB3P0DN86 165 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 CGB7P0DN87 165 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 PTAFRP25105 342 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 CCL8P80075 99 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 RPL39P5Q59GN2 51 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
SEC13-216ENST00000479868 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 LEAP2Q969E1 77 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 SDSLQ96GA7 329 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.78□□□□□ -0.68
SEC13-216ENST00000479868 CLN8Q9UBY8 286 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 KPTNQ9Y664 436 aa10.78□□□□□ -0.68
SEC13-216ENST00000479868 RAB29O14966 203 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 SLC31A2O15432 143 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 TNFSF4P23510 183 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 HBG1P69891 147 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 HBG2P69892 147 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 ADIPOQQ15848 244 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 OR8G2PQ6IF36 304 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 TMEM14EPQ6UXP3 125 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 ETV3LQ6ZN32 361 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 H2BFWTQ7Z2G1 175 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 ZCCHC24Q8N2G6 241 aaKnown RBP10.77□□□□□ -0.68
SEC13-216ENST00000479868 ZDHHC16Q969W1 377 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 GAFA1Q96PS6 74 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 PBDC1Q9BVG4 233 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 IFI27L2Q9H2X8 130 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 OR6C3Q9NZP0 311 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 PKDREJQ9NTG1 2253 aa10.77□□□□□ -0.68
SEC13-216ENST00000479868 IGF2RP11717 2491 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 ATXN7O15265 892 aaPredicted RBP10.77□□□□□ -0.69
SEC13-216ENST00000479868 ZG16O60844 167 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 GYPAP02724 150 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 C1orf229Q6ZS94 237 aaPredicted RBP10.77□□□□□ -0.69
SEC13-216ENST00000479868 Q8TCH9 128 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 OR4C12Q96R67 309 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 CCL13Q99616 98 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 FAM234AQ9H0X4 552 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 VSIRQ9H7M9 311 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 LAMP3Q9UQV4 416 aa10.77□□□□□ -0.69
SEC13-216ENST00000479868 FCGR3BO75015 233 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 OR4A8P0C604 315 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 LRRC75BQ2VPJ9 315 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 SPINK9Q5DT21 86 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 FAM216BQ8N7L0 139 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 SCGB1C1Q8TD33 95 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 SFT2D1Q8WV19 159 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 YLPM1P49750 1951 aaKnown RBP10.76□□□□□ -0.69
SEC13-216ENST00000479868 POLEQ07864 2286 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 A0A1B0GW64 132 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 A0A1W2PPE3 182 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 M0R1X1 148 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 PPIHO43447 177 aaKnown RBP10.76□□□□□ -0.69
SEC13-216ENST00000479868 RBMXL2O75526 392 aaKnown RBP10.76□□□□□ -0.69
SEC13-216ENST00000479868 CD55P08174 381 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 SLC38A11Q08AI6 406 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 DTD1Q8TEA8 209 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
SEC13-216ENST00000479868 KBTBD11-OT1A0A1B0GTJ5 212 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 RBFOX3A6NFN3 312 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 OR13C7P0DN81 318 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 ZNF788Q6ZQV5 615 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 CD300LFQ8TDQ1 290 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 WDR61Q9GZS3 305 aaKnown RBP10.75□□□□□ -0.69
SEC13-216ENST00000479868 SLC35B3Q9H1N7 401 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 NCOR1P1Q9H4R4 102 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 KIAA1456Q9P272 454 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 RELNP78509 3460 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
SEC13-216ENST00000479868 AKR1C3P42330 323 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 192.2 ms