RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 RHOXF1Q8NHV9 184 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
DDX56-210ENST00000479440 HARBI1Q96MB7 349 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 UQCC2Q9BRT2 126 aa12.08□□□□□ -0.48
DDX56-210ENST00000479440 FGF20Q9NP95 211 aaPredicted RBP12.08□□□□□ -0.48
DDX56-210ENST00000479440 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 C2orf70A6NJV1 201 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 MPPED1O15442 326 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 NAPSAO96009 420 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 OR9G9P0C7N8 305 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 UBBP0CG47 229 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 ATF4P18848 351 aaPredicted RBP12.07□□□□□ -0.48
DDX56-210ENST00000479440 KIR2DS2P43631 304 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 MAP2K4P45985 399 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 ETV1P50549 477 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 C6orf201Q7Z4U5 140 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 WFDC3Q8IUB2 231 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 ADAD2Q8NCV1 583 aaKnown RBP12.07□□□□□ -0.48
DDX56-210ENST00000479440 SLC29A1Q99808 456 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 C11orf54Q9H0W9 315 aaPredicted RBP12.07□□□□□ -0.48
DDX56-210ENST00000479440 BABAM2Q9NXR7 383 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 ZNF230Q9UIE0 474 aaPredicted RBP12.07□□□□□ -0.48
DDX56-210ENST00000479440 MGAT4AQ9UM21 535 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
DDX56-210ENST00000479440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
DDX56-210ENST00000479440 IGLV2-23P01705 113 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 CRYGBP07316 175 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 FOLR2P14207 255 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 MYL12AP19105 171 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 DCKP27707 260 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 BMI1P35226 326 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 CEACAM6P40199 344 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 RHOGP84095 191 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 ATP5G2Q06055 141 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 TMEM217Q8N7C4 229 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 PTX4Q96A99 478 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 PGLYRP3Q96LB9 341 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 TMEM59Q9BXS4 323 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
DDX56-210ENST00000479440 AKIP1Q9NQ31 210 aa12.06□□□□□ -0.48
DDX56-210ENST00000479440 DNAH10Q8IVF4 4471 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 A0A1W2PPK0 400 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 IRGMA1A4Y4 181 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 M0R1X1 148 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 DYNC1I1O14576 645 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 APELAP0DMC3 54 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX56-210ENST00000479440 MED21Q13503 144 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.05□□□□□ -0.48
DDX56-210ENST00000479440 KCNG3Q8TAE7 436 aa12.05□□□□□ -0.48
DDX56-210ENST00000479440 EXOSC1Q9Y3B2 195 aaKnown RBP12.05□□□□□ -0.48
DDX56-210ENST00000479440 TRBV6-6A0A0A6YYG2 114 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 MSGN1A6NI15 193 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 LGALS9O00182 355 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 PROP1O75360 226 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 RBMXL2O75526 392 aaKnown RBP12.04□□□□□ -0.48
DDX56-210ENST00000479440 APOC4P55056 127 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 LINC00205P59089 165 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 RPS27AP62979 156 aaKnown RBP12.04□□□□□ -0.48
DDX56-210ENST00000479440 EWSR1Q01844 656 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX56-210ENST00000479440 TNXAQ16473 311 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 GLT8D1Q68CQ7 371 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 ZNF57Q68EA5 555 aaPredicted RBP12.04□□□□□ -0.48
DDX56-210ENST00000479440 DERL3Q96Q80 235 aa12.04□□□□□ -0.48
DDX56-210ENST00000479440 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 SHOXO15266 292 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
DDX56-210ENST00000479440 LALBAP00709 142 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 MAPK3P27361 379 aaPredicted RBP12.03□□□□□ -0.48
DDX56-210ENST00000479440 TAS2R43P59537 309 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
DDX56-210ENST00000479440 RTL8BQ17RB0 113 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 VMA21Q3ZAQ7 101 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 Q6ZWC4 215 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 TMEM61Q8N0U2 210 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 CBR4Q8N4T8 237 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 ZFP41Q8N8Y5 198 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
DDX56-210ENST00000479440 PLEKHJ1Q9NW61 149 aa12.03□□□□□ -0.48
DDX56-210ENST00000479440 TRBV9A0A0B4J1U6 114 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 SPRY2O43597 315 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 CREBL2O60519 120 aaPredicted RBP12.02□□□□□ -0.49
DDX56-210ENST00000479440 CIB2O75838 187 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 EDN2P20800 178 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 RASSF2P50749 326 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 NECAP1Q8NC96 275 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 NICN1Q9BSH3 213 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 TM2D1Q9BX74 207 aa12.02□□□□□ -0.49
DDX56-210ENST00000479440 LOC100130705A0A1B0GUX0 176 aa12.01□□□□□ -0.49
DDX56-210ENST00000479440 PPP5D1E7EU14 171 aa12.01□□□□□ -0.49
DDX56-210ENST00000479440 PRH1P02810 166 aa12.01□□□□□ -0.49
DDX56-210ENST00000479440 RRASP10301 218 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms