RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 FAM25AB3EWG3 89 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 FAM25CB3EWG5 89 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 FAM25GB3EWG6 89 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 OVOL1O14753 267 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 LANCL1O43813 399 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 LYL1P12980 280 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 LSAMPQ13449 338 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 CDNFQ49AH0 187 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 C6orf183Q5T699 404 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
SRRT-209ENST00000474896 HDHD3Q9BSH5 251 aaPredicted RBP12.11□□□□□ -0.47
SRRT-209ENST00000474896 PARP11Q9NR21 331 aa12.11□□□□□ -0.47
SRRT-209ENST00000474896 GAR1Q9NY12 217 aaKnown RBP12.11□□□□□ -0.47
SRRT-209ENST00000474896 TRAV41A0A0B4J266 112 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 XRCC3O43542 346 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 SAP30O75446 220 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 NAPSAO96009 420 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 GSTP1P09211 210 aaKnown RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 CD3GP09693 182 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 FRMD6-AS1P0C7T7 363 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 SPNP16150 400 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 CNTFRP26992 372 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 TAS2R20P59543 309 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 ACTBP60709 375 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 TMEM30BQ3MIR4 351 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 MORN2Q502X0 79 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 TMEM69Q5SWH9 247 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 DLX4Q92988 240 aaPredicted RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 ALX4Q9H161 411 aaPredicted RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 CHMP1AQ9HD42 196 aaPredicted RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 ADAM30Q9UKF2 790 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 ELF5Q9UKW6 265 aaPredicted RBP12.1□□□□□ -0.47
SRRT-209ENST00000474896 A3GALT2U3KPV4 340 aa12.1□□□□□ -0.47
SRRT-209ENST00000474896 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
SRRT-209ENST00000474896 IGHV7-81A0A0B4J1V7 117 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 MRPS15P82914 257 aaKnown RBP12.09□□□□□ -0.47
SRRT-209ENST00000474896 ARFRP1Q13795 201 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 CNPY1Q3B7I2 92 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 HACD4Q5VWC8 232 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 LIN54Q6MZP7 749 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 OR52L2PQ8NGH6 319 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 RIMS4Q9H426 269 aaPredicted RBP12.09□□□□□ -0.47
SRRT-209ENST00000474896 AUNIPQ9H7T9 357 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 TAF9BQ9HBM6 251 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
SRRT-209ENST00000474896 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
SRRT-209ENST00000474896 TRBV6-6A0A0A6YYG2 114 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 GP9P14770 177 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 TALDO1P37837 337 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 SLURP1P55000 103 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 GNG2P59768 71 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 ZNF880Q6PDB4 577 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 MINDY2Q8NBR6 621 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 SETD6Q8TBK2 473 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
SRRT-209ENST00000474896 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
SRRT-209ENST00000474896 LINC01619G3V211 115 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 NBR2O15453 112 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 SSX5O60225 188 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 FCGR3AP08637 254 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 PTHLHP12272 177 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 GNMTQ14749 295 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 MOB1BQ7L9L4 216 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 DIRAS2Q96HU8 199 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 NABP2Q9BQ15 211 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 GHITMQ9H3K2 345 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
SRRT-209ENST00000474896 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
SRRT-209ENST00000474896 DTYMKP23919 212 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 TNFSF8P32971 234 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 S100A5P33763 92 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
SRRT-209ENST00000474896 OR3A3P47888 321 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 PITPNAQ00169 270 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 ECSCRQ19T08 205 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 ACSM6Q6P461 480 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 NPBQ8NG41 125 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 OR6Q1Q8NGQ2 317 aa12.06□□□□□ -0.48
SRRT-209ENST00000474896 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms