RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 LYSMD1Q96S90 227 aa5.05□□□□□ -1.6
SMARCE1-208ENST00000474246 TBX15Q96SF7 602 aa5.05□□□□□ -1.6
SMARCE1-208ENST00000474246 MCHR1Q99705 422 aa5.05□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM70Q9BUB7 260 aa5.05□□□□□ -1.6
SMARCE1-208ENST00000474246 APOOQ9BUR5 198 aa5.05□□□□□ -1.6
SMARCE1-208ENST00000474246 A0A096LPK6 155 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 K7EPK0 472 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 CXCL13O43927 109 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 YIF1AO95070 293 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF682O95780 498 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 TBX6O95947 436 aaPredicted RBP5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 H1F0P07305 194 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 GNB3P16520 340 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF708P17019 499 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 GABRG2P18507 467 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ATF1P18846 271 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 NDUFA6P56556 154 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ISL1P61371 349 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 UBA52P62987 128 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 MSMPQ1L6U9 139 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 TIGITQ495A1 244 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 OR2T5Q6IEZ7 315 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 GPR135Q8IZ08 494 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 GBGT1Q8N5D6 347 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM71E2Q8N5Q1 922 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 TEX45Q8NA69 505 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 OR5AP2Q8NGF4 316 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 OR2T29Q8NH02 315 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 JOSD2Q8TAC2 188 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 FGF14Q92915 247 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 PLEKHB2Q96CS7 222 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 KIR2DL4Q99706 377 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 PRADC1Q9BSG0 188 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ISG20L2Q9H9L3 353 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF586Q9NXT0 402 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 NUFIP1Q9UHK0 495 aaKnown RBP5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 CYSLTR1Q9Y271 337 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 VDAC3Q9Y277 283 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 PLXND1Q9Y4D7 1925 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 CELSR1Q9NYQ6 3014 aa5.04□□□□□ -1.6
SMARCE1-208ENST00000474246 FAM240AA0A1B0GVK7 77 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 A0A1B0GW64 132 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 A0A1W2PRS3 328 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 M0R233 179 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 NME4O00746 187 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SPINT2O43291 252 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 TBL1XO60907 577 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 CSN2P05814 226 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 GLI4P10075 376 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 RAB5AP20339 215 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 GPR183P32249 361 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 PTH2RP49190 550 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 UBE2E1P51965 193 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SRPXP78539 464 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 RPL18AQ02543 176 aaKnown RBP5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 PMAIP1Q13794 54 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 CEACAM16Q2WEN9 425 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 KHDC3LQ587J8 217 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 ZNF684Q5T5D7 378 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 RASL11AQ6T310 242 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 GDPGP1Q6ZNW5 385 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 Q6ZRG5 221 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 MRPL55Q7Z7F7 128 aaKnown RBP5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 C20orf196Q8IYI0 205 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 GPR26Q8NDV2 337 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 OR11G2Q8NGC1 345 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 OR51A4Q8NGJ6 313 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 OR5AR1Q8NGP9 310 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 BMFQ96LC9 184 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 UBE2E2Q96LR5 201 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 ADAT1Q9BUB4 502 aaKnown RBP5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 MED28Q9H204 178 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM133Q9H2Q1 129 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SDK1Q7Z5N4 2213 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 hADV38S2A0JD32 116 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 LYRM9A8MSI8 78 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 F5H697 171 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 BUB3O43684 328 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 MYOD1P15172 320 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 GLRBP48167 497 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 FOXF2Q12947 444 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 BATFQ16520 125 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 NXNL2Q5VZ03 156 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 FOXI2Q6ZQN5 318 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 HOGA1Q86XE5 327 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 TGIF2LYQ8IUE0 185 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 CMTM4Q8IZR5 234 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SLC35G3Q8N808 338 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 C11orf45Q8TAV5 145 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 FNDC9Q8TBE3 224 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 TMEM106AQ96A25 262 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SLAMF6Q96DU3 332 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 MOB1AQ9H8S9 216 aa5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 APOBEC3GQ9HC16 384 aaKnown RBP5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 SOX21Q9Y651 276 aaPredicted RBP5.03□□□□□ -1.6
SMARCE1-208ENST00000474246 CSMD1Q96PZ7 3565 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms