RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 DERL1Q9BUN8 251 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 MPC1Q9Y5U8 109 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 ASCC3Q8N3C0 2202 aaKnown RBP11.55□□□□□ -0.56
PTPRE-204ENST00000455661 ARHGAP21Q5T5U3 1957 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 CNTRLQ7Z7A1 2325 aa11.55□□□□□ -0.56
PTPRE-204ENST00000455661 A0A096LPE4 126 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 A0A1W2PPZ6 126 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ODAMA1E959 279 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZNHIT1O43257 154 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZG16O60844 167 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 TRAPPC6AO75865 159 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 SERF1AO75920 110 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 IL6RP08887 468 aaPredicted RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 COX6A1P12074 109 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 SELEP16581 610 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZBTB34Q8NCN2 500 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ABHD3Q8WU67 409 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 RAB1CQ92928 201 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 CCDC74BQ96LY2 380 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 PKIBQ9C010 78 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 MRPL18Q9H0U6 180 aaKnown RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 TNRC6BQ9UPQ9 1833 aaKnown RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 PGPEP1LA6NFU8 196 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 RBMXL2O75526 392 aaKnown RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 DEFA4P12838 97 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 BMP5P22003 454 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 LHX2P50458 406 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 MLF1P58340 268 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 CCL7P80098 99 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF816Q0VGE8 651 aaPredicted RBP11.54□□□□□ -0.56
PTPRE-204ENST00000455661 C9orf135Q5VTT2 229 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF497Q6ZNH5 498 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF645Q8N7E2 425 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
PTPRE-204ENST00000455661 SIRPB1O00241 398 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 RAC2P15153 192 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 EPHA8P29322 1005 aaPredicted RBP11.53□□□□□ -0.56
PTPRE-204ENST00000455661 TIMP3P35625 211 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 CATR1Q13166 79 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 Q6P435 159 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 GUSBP11Q6P575 273 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 TMEM45BQ96B21 275 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 TP53TG3Q9ULZ0 132 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 ZFP30Q9Y2G7 519 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 WIPI2Q9Y4P8 454 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 TNRC6AQ8NDV7 1962 aaKnown RBP11.53□□□□□ -0.56
PTPRE-204ENST00000455661 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 A0A1W2PQM1 296 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 SIAH2O43255 324 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 RAMP3O60896 148 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 NGFP01138 241 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 CBLN1P23435 193 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 CDKN1AP38936 164 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 RAB7AP51149 207 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 SIGLECL1Q8N7X8 197 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
PTPRE-204ENST00000455661 IL36BQ9NZH7 164 aa11.53□□□□□ -0.56
PTPRE-204ENST00000455661 SPINK2P20155 84 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 LTBRP36941 435 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 WIPI1Q5MNZ9 446 aaPredicted RBP11.52□□□□□ -0.57
PTPRE-204ENST00000455661 H2BFWTQ7Z2G1 175 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 SMRP1Q8NCR6 262 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 PRRG4Q9BZD6 226 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 A8MXE2 369 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 C3orf80F5H4A9 247 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 J3QT63 122 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 RAB29O14966 203 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 RHBDL1O75783 438 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 P0C879 139 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 Q0VG73 95 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 AGBL5Q8NDL9 886 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 OR1L6Q8NGR2 347 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 LINC00470Q9BZP3 86 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 OCIAD1Q9NX40 245 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 ZNF586Q9NXT0 402 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 KCNIP1Q9NZI2 227 aa11.52□□□□□ -0.57
PTPRE-204ENST00000455661 DOCK11Q5JSL3 2073 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 FCN1O00602 326 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 SS18L1O75177 396 aaPredicted RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 S1PR2O95136 353 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 OR2H2O95918 312 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 EN2P19622 333 aaPredicted RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 HNF1AP20823 631 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 CD1BP29016 333 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 EDDM3BP56851 147 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 PLP2Q04941 152 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 C11orf42Q8N5U0 333 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms