RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 IGKV1D-8A0A087WSZ0 117 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 TRBV6-7A0A0A0MS04 114 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 METTL21EPA6NDL7 271 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 CA2P00918 260 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 APOA2P02652 100 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 TALDO1P37837 337 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 CRIP2P52943 208 aaPredicted RBP12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 C9orf66Q5T8R8 295 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 PPP1R27Q86WC6 154 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 PDPNQ86YL7 162 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 FCGR1BQ92637 280 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 C5orf30Q96GV9 206 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 RNF5Q99942 180 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 TOLLIPQ9H0E2 274 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 SLC35D1Q9NTN3 355 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 SDHAF2Q9NX18 166 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 STUB1Q9UNE7 303 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 NUBP2Q9Y5Y2 271 aa12.77□□□□□ -0.37
NCKIPSD-208ENST00000454134 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 SLC25A17O43808 307 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 FGF9P31371 208 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 RUNX1Q01196 453 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZNF616Q08AN1 781 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 UNQ5815/PRO19632Q6UWF5 114 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 FLYWCH2Q96CP2 140 aaKnown RBP12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 GINS4Q9BRT9 223 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 OR51E2Q9H255 320 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 DAPK2Q9UIK4 370 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 SCOCQ9UIL1 159 aa12.76□□□□□ -0.37
NCKIPSD-208ENST00000454134 SPDEFO95238 335 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 OR8U8P0C7N1 319 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 ECI1P42126 302 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 TMEM267Q0VDI3 215 aaPredicted RBP12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZNF260Q3ZCT1 412 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 CDNFQ49AH0 187 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 ACTBL2Q562R1 376 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZNF773Q6PK81 442 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZNF562Q6V9R5 426 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 GRPEL2Q8TAA5 225 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 MS4A10Q96PG2 267 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 PRR25Q96S07 402 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 SSR3Q9UNL2 185 aa12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 RBM7Q9Y580 266 aaKnown RBP12.75□□□□□ -0.37
NCKIPSD-208ENST00000454134 J3QRK9 145 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 ARPC1BO15143 372 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 FXYD3Q14802 87 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 TCTEX1D1Q8N7M0 179 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 BVESQ8NE79 360 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 DCUN1D4Q92564 292 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 ARPC1AQ92747 370 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 ST6GALNAC5Q9BVH7 336 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 RNF167Q9H6Y7 350 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 ZMAT5Q9UDW3 170 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 RRP15Q9Y3B9 282 aaKnown RBP12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
NCKIPSD-208ENST00000454134 RAMP3O60896 148 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 DIRAS3O95661 229 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 IGLV2-23P01705 113 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 IGHV3-11P01762 117 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 SDC2P34741 201 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 SLURP1P55000 103 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 TPPP2P59282 170 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 MXD1Q05195 221 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 CD69Q07108 199 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 AKIRIN2Q53H80 203 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 Q6ZS49 121 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 TPRA1Q86W33 373 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 LGALS14Q8TCE9 139 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 NUDCD2Q8WVJ2 157 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.73□□□□□ -0.37
NCKIPSD-208ENST00000454134 IGHV4OR15-8A0A075B7B6 117 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 A0A087WW49 117 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 TMEM235A6NFC5 223 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 CNIH1O95406 144 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 CRYGBP07316 175 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 DTYMKP23919 212 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 NEDD8Q15843 81 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 SRSF7Q16629 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 HACD4Q5VWC8 232 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 SFXN4Q6P4A7 337 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 DLX4Q92988 240 aaPredicted RBP12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 B9D2Q9BPU9 175 aa12.72□□□□□ -0.37
NCKIPSD-208ENST00000454134 SRRM4A7MD48 611 aaKnown RBP12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 OVOL1O14753 267 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 SHOXO15266 292 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 LGALS7P47929 136 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 ARL6IP1Q15041 203 aa12.71□□□□□ -0.37
NCKIPSD-208ENST00000454134 RTL8BQ17RB0 113 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms