RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 SWI5Q1ZZU3 235 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 CR1LQ2VPA4 569 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 NUP37Q8NFH4 326 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 NINJ1Q92982 152 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 SNX22Q96L94 193 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 RAB40CQ96S21 281 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 TMEM231Q9H6L2 316 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 CACFD1Q9UGQ2 172 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 ODAMA1E959 279 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 E7EQL1 145 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 MGST3O14880 152 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 CST7O76096 145 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 RAB5CP51148 216 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 DEFA5Q01523 94 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 EDDM3AQ14507 147 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 ARL6IP6Q8N6S5 226 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 OR5C1Q8NGR4 320 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 TREM1Q9NP99 234 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 UQCC1Q9NVA1 299 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 CISD1Q9NZ45 108 aaKnown RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 FAM96BQ9Y3D0 163 aa8.88□□□□□ -0.99
PKP4-206ENST00000452162 PRRC2AP48634 2157 aaKnown RBP8.88□□□□□ -0.99
PKP4-206ENST00000452162 SPINT2O43291 252 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 TXNL1O43396 289 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 IGHV1-46P01743 117 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 CD5P06127 495 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 ADH4P08319 380 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 P0C879 139 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 BRWD1-AS2P59051 145 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 SPAG16Q8N0X2 631 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 RFESDQ8TAC1 157 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 STRAPQ9Y3F4 350 aaKnown RBP8.87□□□□□ -0.99
PKP4-206ENST00000452162 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 WSB1Q9Y6I7 421 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 IGHV3-43A0A0B4J1X8 118 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 K7N7A8 449 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 SYNGR2O43760 224 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 RAMP3O60896 148 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 IGHV3-43DP0DP04 118 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 ATP6V0CP27449 155 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 FHITP49789 147 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 SELENOVP59797 346 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 RPL23AP62750 156 aaKnown RBP8.87□□□□□ -0.99
PKP4-206ENST00000452162 FGFRL1Q8N441 504 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 PPP1R35Q8TAP8 253 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 AIFM2Q9BRQ8 373 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 C19orf12Q9NSK7 152 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 COA4Q9NYJ1 87 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 IL19Q9UHD0 177 aa8.87□□□□□ -0.99
PKP4-206ENST00000452162 MEX3AA1L020 520 aaKnown RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 RNASEK-C17orf49H0YIS7 233 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 SOD3P08294 240 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 CD80P33681 288 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 CAMLGP49069 296 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TNFAIP6P98066 277 aaPredicted RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 CATR1Q13166 79 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ZNF273Q14593 569 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 GUCA2BQ16661 112 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ZNF600Q6ZNG1 722 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TMEM182Q6ZP80 229 aaPredicted RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 TCTEX1D1Q8N7M0 179 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ATP5SQ99766 215 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 AGMATQ9BSE5 352 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 NKX6-2Q9C056 277 aaPredicted RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 GCM1Q9NP62 436 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 RFNGQ9Y644 331 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 OTOGQ6ZRI0 2925 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 C17orf98A8MV24 154 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 FAM157AC9JC47 383 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 FAM90A26D6RGX4 464 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 F8W036 122 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 H3BP45 60 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TRIM77I1YAP6 450 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TOR1AO14656 332 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 AGPAT2O15120 278 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ST8SIA5O15466 376 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 GZMHP20718 246 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 SULT1A1P50225 295 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 MIDNQ504T8 468 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 BTNL3Q6UXE8 466 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ZNF66Q6ZN08 573 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 STX12Q86Y82 276 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 PUSL1Q8N0Z8 303 aaKnown RBP8.86□□□□□ -0.99
PKP4-206ENST00000452162 COMMD1Q8N668 190 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TMEM217Q8N7C4 229 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 Q8TCH9 128 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 TCTEX1D2Q8WW35 142 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 SCRT1Q9BWW7 348 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 SEC11CQ9BY50 192 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 NCOR1P1Q9H4R4 102 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 RNF7Q9UBF6 113 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 JPT1Q9UK76 154 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 PSG11Q9UQ72 335 aa8.86□□□□□ -0.99
PKP4-206ENST00000452162 LAMP3Q9UQV4 416 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms