RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DENND4CQ5VZ89 1909 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 M0R143 59 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 KLF7O75840 302 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-206ENST00000445265 TRGC1P0CF51 173 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 OR4D5Q8NGN0 318 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 SIGLEC12Q96PQ1 595 aa14.17□□□□□ -0.14
TCOF1-206ENST00000445265 ODAMA1E959 279 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 CEACAM18A8MTB9 384 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 PRR33A8MZF0 331 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 K7ESF4 209 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 MMP7P09237 267 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-206ENST00000445265 ACP1P24666 158 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 ID3Q02535 119 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 AARDQ4LEZ3 155 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 FAM209BQ5JX69 171 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 ZNF343Q6P1L6 599 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 GFRALQ6UXV0 394 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 RNF144BQ7Z419 303 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 OR1P1Q8NH06 330 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 CCL17Q92583 94 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 IGKV1-12A0A0C4DH73 117 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 IGKV1D-12P01611 117 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 CELA3AP09093 270 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 CHRNB4P30926 498 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 LOXL4Q96JB6 756 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 SPTA1P02549 2419 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 IGHV3OR15-7A0A075B7D8 119 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 ZNF253O75346 499 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 LYL1P12980 280 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 MISP3Q96FF7 219 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 PARLQ9H300 379 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 KLK10O43240 276 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 OR10J1P30954 320 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 HLA-DRB5Q30154 266 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 GCSAMQ8N6F7 178 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 IL19Q9UHD0 177 aa14.16□□□□□ -0.14
TCOF1-206ENST00000445265 IGKV1D-13A0A0B4J2D9 117 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 IGKV1-13P0DP09 117 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 HNRNPA3P51991 378 aaKnown RBP14.15□□□□□ -0.14
TCOF1-206ENST00000445265 OR1L6Q8NGR2 347 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 CLDND2Q8NHS1 167 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 RHBDL1O75783 438 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 HARBI1Q96MB7 349 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 GGACTQ9BVM4 153 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 SSTP61278 116 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 OR5AU1Q8NGC0 362 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 OR1L8Q8NGR8 309 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 SLX1AQ9BQ83 275 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 IL17BQ9UHF5 180 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 OR51B2Q9Y5P1 312 aa14.15□□□□□ -0.14
TCOF1-206ENST00000445265 AHRRA9YTQ3 701 aa14.15□□□□□ -0.15
TCOF1-206ENST00000445265 GCGP01275 180 aa14.15□□□□□ -0.15
TCOF1-206ENST00000445265 OTX1P32242 354 aaPredicted RBP14.15□□□□□ -0.15
TCOF1-206ENST00000445265 PHF3Q92576 2039 aaKnown RBP14.14□□□□□ -0.15
TCOF1-206ENST00000445265 SRD5A3Q9H8P0 318 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 WFDC1Q9HC57 220 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 IL36RNQ9UBH0 155 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 JPT1Q9UK76 154 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 SNURFLB1AK76 121 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 FLYWCH2Q96CP2 140 aaKnown RBP14.14□□□□□ -0.15
TCOF1-206ENST00000445265 SEBOXQ9HB31 216 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-206ENST00000445265 FANCMQ8IYD8 2048 aa14.14□□□□□ -0.15
TCOF1-206ENST00000445265 ETV2O00321 342 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 IER3P46695 156 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 TCL1AP56279 114 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ZFP36L1Q07352 338 aaKnown RBP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 SCGB2A2Q13296 93 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 WDR25Q64LD2 544 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 CYP2G1PQ6ZSU1 146 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 RTN4RL2Q86UN3 420 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 PDPNQ86YL7 162 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 C5orf63A6NC05 138 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 COLCA2A8K830 154 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 FOLR2P14207 255 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ZNF525Q8N782 197 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ZNF524Q96C55 264 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 MEGF10Q96KG7 1140 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 OR2V2Q96R30 315 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 TREM2Q9NZC2 230 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ZNF106Q9H2Y7 1883 aaKnown RBP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 C12orf77C9JDV5 145 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 VENTXO95231 258 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ZNF883P0CG24 379 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 PRRX1P54821 245 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 BCL2L2Q92843 193 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-206ENST00000445265 RPEQ96AT9 228 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 ARL2-SNX15V9GYD0 113 aa14.13□□□□□ -0.15
TCOF1-206ENST00000445265 IGKV1-27A0A075B6S5 117 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 A0A1W2PPE3 182 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 RNASEKQ6P5S7 137 aaKnown RBP14.12□□□□□ -0.15
TCOF1-206ENST00000445265 STXBP6Q8NFX7 210 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 RNF24Q9Y225 148 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 IFNL4K9M1U5 179 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 FOSL1P15407 271 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 LHX2P50458 406 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 MIC13Q5XKP0 118 aa14.12□□□□□ -0.15
TCOF1-206ENST00000445265 Q6ZT83 130 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms