RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 RPS10P5Q9NQ39 176 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 SERTAD4Q9NUC0 356 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM100Q9NV29 134 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM30AQ9NV96 361 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF226Q9NYT6 803 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 KCNIP1Q9NZI2 227 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 SOX21Q9Y651 276 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 SIRT4Q9Y6E7 314 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 BDP1A6H8Y1 2624 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 PIEZO1Q92508 2521 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 NRXN2Q9P2S2 1712 aa3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 COL2A1P02458 1487 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P9-201ENST00000441799 CDH23Q9H251 3354 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 COL4A5P29400 1685 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZFHX4Q86UP3 3567 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 IGHV2-26A0A0B4J1V2 119 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 LOC102725191A0A1B0GVB3 256 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 TCRBV7S2A1N4TA0A589 114 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 CD300LBA8K4G0 201 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF593O00488 134 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 CD5LO43866 347 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 EFNA2O43921 213 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 YPEL1O60688 119 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 CLDN14O95500 239 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 CA1P00915 261 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SPINK8P0C7L1 97 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 TRGC1P0CF51 173 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 NTF3P20783 257 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 GPD1P21695 349 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 CTRLP40313 264 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 GUCA1AP43080 201 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 NUDT2P50583 147 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF83P51522 516 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 PGGT1BP53609 377 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 DLX1P56177 255 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 LOXL3P58215 753 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 YPEL3P61236 119 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SRYQ05066 204 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 KLRD1Q13241 179 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 RBM39Q14498 530 aaKnown RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ATXN7L3Q14CW9 347 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 KIAA0040Q15053 153 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ASPHD1Q5U4P2 390 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 MRPL54Q6P161 138 aaKnown RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 PTAR1Q7Z6K3 402 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 OOSP2Q86WS3 158 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC35F2Q8IXU6 374 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 KLHDC1Q8N7A1 406 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF615Q8N8J6 731 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZFP41Q8N8Y5 198 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF548Q8NEK5 533 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR8G5Q8NG78 346 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 OR11H6Q8NGC7 330 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 MFSD8Q8NHS3 518 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 PPTC7Q8NI37 304 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SLC25A40Q8TBP6 338 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 TMEM170AQ8WVE7 144 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 FRZBQ92765 325 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 PNPLA2Q96AD5 504 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 MUCL1Q96DR8 90 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 YPEL2Q96QA6 119 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SDF2Q99470 211 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 KIR2DL4Q99706 377 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SPIN2AQ99865 258 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SPIN2BQ9BPZ2 258 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 SOSTQ9BQB4 213 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 FAM173AQ9BQD7 235 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 AGMATQ9BSE5 352 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 C19orf24Q9BVV8 132 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 GGTLC1Q9BX51 225 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 MRPL32Q9BYC8 188 aaKnown RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 FBXL15Q9H469 300 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 DUSP21Q9H596 190 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 DLL3Q9NYJ7 618 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 EHFQ9NZC4 300 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 MDFICQ9P1T7 246 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 LSM7Q9UK45 103 aaKnown RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 FUT9Q9Y231 359 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 NTNG1Q9Y2I2 539 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 POLR1DQ9Y2S0 133 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 COQ4Q9Y3A0 265 aa3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 ZNF638Q14966 1978 aaKnown RBP3.91□□□□□ -1.78
HMGB3P9-201ENST00000441799 TRAV18A0A075B6X5 111 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 OR2M5A3KFT3 312 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 C7orf71A4D174 169 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 GGT3PA6NGU5 568 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 FAM157AC9JC47 383 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 FNDC10F2Z333 226 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 K7EP34 96 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 CLDN11O75508 207 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 REM1O75628 298 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 GRAP2O75791 330 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 ATP5LO75964 103 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 GPX1P07203 203 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 IL3P08700 152 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 GLIPR1P48060 266 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 TPPP2P59282 170 aa3.9□□□□□ -1.79
HMGB3P9-201ENST00000441799 DYNLT1P63172 113 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms